Aniseed - Gene card

Gene Card

Best human hits

NSMCE2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010571

Gene Model ID

KH2012:KH.L106.11

Location

KhL106:28174..30378

Transcript Models and Sequences

KH2012:KH.L106.11.v1.A.nonSL2-2
KH2012:KH.L106.11.v1.A.nonSL3-2
KH2012:KH.L106.11.v1.A.nonSL4-2
KH2012:KH.L106.11.v1.A.nonSL5-2
KH2012:KH.L106.11.v1.A.nonSL6-2
KH2012:KH.L106.11.v1.A.SL1-2
KH2012:KH.L106.11.v2.A.nonSL2-2
KH2012:KH.L106.11.v2.A.nonSL3-2
KH2012:KH.L106.11.v2.A.nonSL4-2
KH2012:KH.L106.11.v2.A.nonSL5-2
KH2012:KH.L106.11.v2.A.nonSL6-2
KH2012:KH.L106.11.v2.A.SL1-2
KH2012:KH.L106.11.v2.A.SL7-2

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000014932

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg100c05

Plate: R1CiGC40n16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Znf_RING/FYVE/PHD	Gene3D	Zinc finger, RING/FYVE/PHD-type
Nse2(Mms21)	PANTHER	E3 SUMO-protein ligase Nse2 (Mms21)
Znf_MIZ	CDD	Zinc finger, MIZ-type
Znf_MIZ	Pfam	Zinc finger, MIZ-type

GOSlim

20 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
DNA repair	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
cell cycle	Orthology	biological process
zinc ion binding	Orthology	molecular function
nuclear body	Orthology	cellular component
transferase activity	Orthology	molecular function
metal ion binding	Orthology	molecular function
cell division	Orthology	biological process
organelle organization	Orthology	biological process
DNA metabolic process	Orthology	biological process
intracellular organelle part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
protein modification by small protein conjugation	Orthology	biological process
ubiquitin-like protein transferase activity	Orthology	molecular function
macromolecular complex	Orthology	cellular component
mitotic cell cycle phase transition	Orthology	biological process
cellular response to stress	Orthology	biological process

GO (Orthology)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
telomere maintenance via recombination	Hs	biological process
double-strand break repair via homologous recombination	Hs	biological process
chromosome, telomeric region	Hs	cellular component
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
chromosome	Hs	cellular component
DNA repair	Hs	biological process
DNA recombination	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
cell cycle	Hs	biological process
zinc ion binding	Hs	molecular function
nuclear body	Hs	cellular component
PML body	Hs	cellular component
transferase activity	Hs	molecular function
protein sumoylation	Hs	biological process
SUMO transferase activity	Hs	molecular function
Smc5-Smc6 complex	Hs	cellular component
positive regulation of mitotic metaphase/anaphase transition	Hs	biological process
metal ion binding	Hs	molecular function
cell division	Hs	biological process
cellular senescence	Hs	biological process

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
chromosome, telomeric region	Hs	cellular component	79.0	1.36e-17
protein binding	Hs	molecular function	79.0	1.36e-17
nucleus	Hs	cellular component	79.0	1.36e-17
nucleoplasm	Hs	cellular component	79.0	1.36e-17
chromosome	Hs	cellular component	79.0	1.36e-17
zinc ion binding	Hs	molecular function	79.0	1.36e-17
nuclear body	Hs	cellular component	79.0	1.36e-17
PML body	Hs	cellular component	79.0	1.36e-17
transferase activity	Hs	molecular function	79.0	1.36e-17
SUMO transferase activity	Hs	molecular function	79.0	1.36e-17
Smc5-Smc6 complex	Hs	cellular component	79.0	1.36e-17
metal ion binding	Hs	molecular function	79.0	1.36e-17

GO (InterProScan)