Aniseed - Gene card

Gene Card

Best human hits

ARPC2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010579

Gene Model ID

KH2012:KH.L106.19

Location

KhL106:46542..47848

Transcript Models and Sequences

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000001241
NCBI Reference Sequence	XM_002125678.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad055m04

Plate: R1CiGC05d04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
ARPC2/4	SUPERFAMILY	Arp2/3 complex subunit 2/4
ARPC2/4	Gene3D	Arp2/3 complex subunit 2/4
ARPC2	PANTHER	Actin-related protein 2/3 complex subunit 2
ARPC2	Pfam	Actin-related protein 2/3 complex subunit 2

GOSlim

26 results

GO Term	Annotation Origin	Type
actin binding	Orthology	molecular function
protein binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
endosome	Orthology	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Orthology	cellular component
plasma membrane	Orthology	cellular component
focal adhesion	Orthology	cellular component
lamellipodium	Orthology	cellular component
cell junction	Orthology	cellular component
cell leading edge	Orthology	cellular component
cell projection	Orthology	cellular component
neuron projection	Orthology	cellular component
synapse	Orthology	cellular component
actin filament binding	Orthology	molecular function
membrane organization	Orthology	biological process
extracellular exosome	Orthology	cellular component
organelle organization	Orthology	biological process
structural molecule activity	Orthology	molecular function
cytoskeletal part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cell projection assembly	Orthology	biological process
cell projection membrane	Orthology	cellular component
cell surface receptor signaling pathway	Orthology	biological process
cell morphogenesis involved in differentiation	Orthology	biological process
cell adhesion	Orthology	biological process

GO (Orthology)

28 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
actin binding	Hs	molecular function
structural constituent of cytoskeleton	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
endosome	Hs	cellular component
cytosol	Hs	cellular component
cytoskeleton	Hs	cellular component
Arp2/3 protein complex	Hs	cellular component
plasma membrane	Hs	cellular component
focal adhesion	Hs	cellular component
positive regulation of lamellipodium assembly	Hs	biological process
actin cytoskeleton	Hs	cellular component
lamellipodium	Hs	cellular component
actin filament polymerization	Hs	biological process
cell junction	Hs	cellular component
regulation of actin filament polymerization	Hs	biological process
positive regulation of actin filament polymerization	Hs	biological process
cell leading edge	Hs	cellular component
Arp2/3 complex-mediated actin nucleation	Hs	biological process
muscle cell projection membrane	Hs	cellular component
cell projection	Hs	cellular component
neuron projection	Hs	cellular component
synapse	Hs	cellular component
ephrin receptor signaling pathway	Hs	biological process
actin filament binding	Hs	molecular function
membrane organization	Hs	biological process
extracellular exosome	Hs	cellular component
positive regulation of substrate adhesion-dependent cell spreading	Hs	biological process

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
actin binding	Hs	molecular function	436	1.56e-155
structural constituent of cytoskeleton	Hs	molecular function	436	1.56e-155
protein binding	Hs	molecular function	436	1.56e-155
cytoplasm	Hs	cellular component	436	1.56e-155
endosome	Hs	cellular component	436	1.56e-155
cytosol	Hs	cellular component	436	1.56e-155
cytoskeleton	Hs	cellular component	436	1.56e-155
Arp2/3 protein complex	Hs	cellular component	436	1.56e-155
plasma membrane	Hs	cellular component	436	1.56e-155
focal adhesion	Hs	cellular component	436	1.56e-155
actin cytoskeleton	Hs	cellular component	436	1.56e-155
lamellipodium	Hs	cellular component	436	1.56e-155
cell junction	Hs	cellular component	436	1.56e-155
cell leading edge	Hs	cellular component	436	1.56e-155
muscle cell projection membrane	Hs	cellular component	436	1.56e-155
cell projection	Hs	cellular component	436	1.56e-155
neuron projection	Hs	cellular component	436	1.56e-155
synapse	Hs	cellular component	436	1.56e-155
actin filament binding	Hs	molecular function	436	1.56e-155
extracellular exosome	Hs	cellular component	436	1.56e-155

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
Arp2/3 protein complex	PANTHER	cellular component	4.8E-138
actin cytoskeleton	PANTHER	cellular component	4.8E-138
actin filament polymerization	Gene3D	biological process	2.1E-81
regulation of actin filament polymerization	PANTHER	biological process	4.8E-138
Arp2/3 complex-mediated actin nucleation	PANTHER	biological process	4.8E-138