Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000007544
NCBI Reference Sequence	XM_002126613.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cicl027m06

Plate: R1CiGC11j16

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

29 results

IPR Term	Analysis	Definition
Pro-tRNA_synth_II	Gene3D	Prolyl-tRNA synthetase, class II
aa-tRNA-synt_IIb	Pfam	Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
S15_NS1_RNA-bd	SUPERFAMILY	S15/NS1, RNA-binding
Pro-tRNA_synth_II	SUPERFAMILY	Prolyl-tRNA synthetase, class II
Pro-tRNA-ligase_IIa	PRINTS	Proline-tRNA ligase, class IIa
Pro-tRNA-ligase_IIa_arc-type	TIGRFAM	Proline-tRNA ligase, class IIa, archaeal-type
aa-tRNA-synth_II	ProSiteProfiles	Aminoacyl-tRNA synthetase, class II
WHEP-TRS_dom	ProSiteProfiles	WHEP-TRS domain
Anticodon-bd	Pfam	Anticodon-binding
WHEP-TRS_dom	Pfam	WHEP-TRS domain
ProRS_core_arch_euk	CDD	Prolyl-tRNA synthetase, catalytic domain
Pro-tRNA-ligase_IIa_arc-type	Hamap	Proline-tRNA ligase, class IIa, archaeal-type
WHEP-TRS_dom	ProSitePatterns	WHEP-TRS domain
WHEP-TRS_dom	SMART	WHEP-TRS domain
Pro-tRNA_ligase_II_C	SMART	Proline-tRNA ligase, class II, C-terminal
Pro-tRNA_ligase_II_C	Pfam	Proline-tRNA ligase, class II, C-terminal
Anticodon-bd_dom_sf	Gene3D	Anticodon-binding domain superfamily
Rbsml_L25/Gln-tRNA_synth_N	Gene3D	Ribosomal protein L25/Gln-tRNA synthetase, N-terminal
Ribosomal_L25/Gln-tRNA_synth	SUPERFAMILY	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily
Glu/Gln-tRNA-synth	PRINTS	Glutamyl/glutaminyl-tRNA synthetase
Glu-tRNA-synth_arc/euk	Hamap	Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic
Glu-tRNA-synth_arc/euk	TIGRFAM	Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic
aa-tRNA-synth_I_CS	ProSitePatterns	Aminoacyl-tRNA synthetase, class I, conserved site
Glutathione-S-Trfase_C_sf	SUPERFAMILY	Glutathione S-transferase, C-terminal domain superfamily
Glu/Gln-tRNA-synth_Ib_codon-bd	Pfam	Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
Glu/Gln-tRNA-synth_Ib_cat-dom	Pfam	Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
Rossmann-like_a/b/a_fold	Gene3D	Rossmann-like alpha/beta/alpha sandwich fold
GST_C	Pfam	Glutathione S-transferase, C-terminal
Glutathione-S-Trfase_C-like	ProSiteProfiles	Glutathione S-transferase, C-terminal-like

GOSlim

27 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
RNA binding	Orthology	molecular function
catalytic activity	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
mitochondrion	Blast	cellular component
mitochondrial matrix	Blast	cellular component
cytosol	Orthology	cellular component
metabolic process	Orthology	biological process
zinc ion binding	Orthology	molecular function
membrane	Orthology	cellular component
integral component of membrane	Blast	cellular component
ligase activity	Orthology	molecular function
protein kinase binding	Blast	molecular function
macromolecular complex	Orthology	cellular component
identical protein binding	Orthology	molecular function
protein homodimerization activity	Orthology	molecular function
metal ion binding	Orthology	molecular function
regulation of gene expression	Orthology	biological process
RNA metabolic process	Orthology	biological process
intracellular part	Orthology	cellular component
negative regulation of gene expression	Orthology	biological process
enzyme binding	Orthology	molecular function
innate immune response	Orthology	biological process
enzyme regulator activity	Blast	molecular function
protein kinase activity	Blast	molecular function

GO (Orthology)

30 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
RNA binding	Hs	molecular function
catalytic activity	Hs	molecular function
aminoacyl-tRNA ligase activity	Hs	molecular function
glutamate-tRNA ligase activity	Hs	molecular function
proline-tRNA ligase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
translation	Hs	biological process
regulation of translation	Hs	biological process
tRNA aminoacylation for protein translation	Hs	biological process
glutamyl-tRNA aminoacylation	Hs	biological process
prolyl-tRNA aminoacylation	Hs	biological process
metabolic process	Hs	biological process
zinc ion binding	Hs	molecular function
membrane	Hs	cellular component
ligase activity	Hs	molecular function
aminoacyl-tRNA synthetase multienzyme complex	Hs	cellular component
negative regulation of translation	Hs	biological process
intracellular ribonucleoprotein complex	Hs	cellular component
RNA stem-loop binding	Hs	molecular function
identical protein binding	Hs	molecular function
protein homodimerization activity	Hs	molecular function
tRNA aminoacylation	Hs	biological process
metal ion binding	Hs	molecular function
GTPase binding	Hs	molecular function
cellular response to interferon-gamma	Hs	biological process
GAIT complex	Hs	cellular component

GO (Blast)

30 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
tRNA binding	Hs	molecular function	67.4	3.25e-11
nucleotide binding	Hs	molecular function	1014	0.0
RNA binding	Hs	molecular function	1014	0.0
catalytic activity	Hs	molecular function	1014	0.0
aminoacyl-tRNA ligase activity	Hs	molecular function	1014	0.0
glutamate-tRNA ligase activity	Hs	molecular function	1014	0.0
glutamine-tRNA ligase activity	Hs	molecular function	233	8.05e-64
proline-tRNA ligase activity	Hs	molecular function	1014	0.0
protein kinase inhibitor activity	Hs	molecular function	233	8.05e-64
protein binding	Hs	molecular function	1014	0.0
ATP binding	Hs	molecular function	1014	0.0
cytoplasm	Hs	cellular component	1014	0.0
mitochondrion	Hs	cellular component	67.4	3.25e-11
mitochondrial matrix	Hs	cellular component	233	8.05e-64
cytosol	Hs	cellular component	1014	0.0
zinc ion binding	Hs	molecular function	1014	0.0
membrane	Hs	cellular component	1014	0.0
integral component of membrane	Hs	cellular component	233	8.05e-64
ligase activity	Hs	molecular function	1014	0.0
aminoacyl-tRNA synthetase multienzyme complex	Hs	cellular component	1014	0.0
protein kinase binding	Hs	molecular function	233	8.05e-64
intracellular ribonucleoprotein complex	Hs	cellular component	1014	0.0
macromolecular complex	Hs	cellular component	233	8.05e-64
RNA stem-loop binding	Hs	molecular function	1014	0.0
identical protein binding	Hs	molecular function	1014	0.0
protein homodimerization activity	Hs	molecular function	1014	0.0
metal ion binding	Hs	molecular function	1014	0.0
glutamate-tRNA(Gln) ligase activity	Hs	molecular function	67.4	3.25e-11
GTPase binding	Hs	molecular function	1014	0.0
GAIT complex	Hs	cellular component	1014	0.0

GO (InterProScan)

9 results

GO Term	Analysis	Type	e-value
nucleotide binding	Gene3D	molecular function	1.5E-30
aminoacyl-tRNA ligase activity	Pfam	molecular function	3.3E-107
proline-tRNA ligase activity	TIGRFAM	molecular function	1.4E-175
ATP binding	TIGRFAM	molecular function	1.4E-175
cytoplasm	TIGRFAM	cellular component	1.4E-175
translation	SUPERFAMILY	biological process	1.41E-48
glutamyl-tRNA aminoacylation	TIGRFAM	biological process	8.6E-144
prolyl-tRNA aminoacylation	TIGRFAM	biological process	1.4E-175
tRNA aminoacylation	Pfam	biological process	3.3E-107

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Gateway full ORF

cien86405

cien134442

Gene collection 1 (N. Satoh)

cieg014f21

cicl027m06

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)