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GENE CARD

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Gene Card

Best human hits

RPS27A; UBB; UBC

Unique Gene ID

Cirobu.g00010748

Gene Model ID

KH2012:KH.L116.19

Location

KhL116:337089..342696

Collections

Gateway full ORF

2 results

cima8111553

Plate: VES74_K02

cima894145

Plate: VES71_E11

Gene collection 1 (N. Satoh)

5 results

cicl008b08

Plate: R1CiGC09a14

cicl016g24

Plate: R1CiGC10i18

cilv005k05

Plate: R1CiGC25i02

cibd079e22

Plate: R1CiGC38p20

cign072d16

Plate: R1CiGC42n18

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Ubiquitin_CS ProSitePatterns Ubiquitin conserved site
Ubiquitin-like_domsf SUPERFAMILY Ubiquitin-like domain superfamily
Ubiquitin_dom Pfam Ubiquitin domain
Ubiquitin_dom SMART Ubiquitin domain
Ubiquitin_dom ProSiteProfiles Ubiquitin domain
Ubiquitin PRINTS Ubiquitin

GOSlim

75 results

GO Term Annotation Origin Type
G2/M transition of mitotic cell cycle Orthology biological process
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
protein polyubiquitination Orthology biological process
RNA binding Orthology molecular function
structural constituent of ribosome Blast molecular function
protein binding Orthology molecular function
extracellular space Orthology cellular component
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
nucleolus Blast cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
cytosol Orthology cellular component
ribosome Blast cellular component
plasma membrane Orthology cellular component
protein folding Orthology biological process
Notch signaling pathway Orthology biological process
membrane Blast cellular component
protein ubiquitination Orthology biological process
cytokine-mediated signaling pathway Orthology biological process
vesicle Orthology cellular component
neuron projection Orthology cellular component
neuronal cell body Orthology cellular component
positive regulation of apoptotic process Orthology biological process
negative regulation of apoptotic process Orthology biological process
myelin sheath Orthology cellular component
innate immune response Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
metal ion binding Blast molecular function
neuron projection morphogenesis Orthology biological process
transmembrane transport Orthology biological process
membrane organization Orthology biological process
extracellular exosome Orthology cellular component
negative regulation of canonical Wnt signaling pathway Orthology biological process
positive regulation of canonical Wnt signaling pathway Orthology biological process
intracellular signal transduction Orthology biological process
protein phosphorylation Orthology biological process
positive regulation of catalytic activity Orthology biological process
protein serine/threonine kinase activity Orthology molecular function
positive regulation of signal transduction Orthology biological process
organelle organization Orthology biological process
DNA repair Orthology biological process
enzyme binding Orthology molecular function
signal transduction Orthology biological process
whole membrane Orthology cellular component
mitochondrial membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
oxidation-reduction process Orthology biological process
cellular process Orthology biological process
cell Orthology cellular component
cell surface receptor signaling pathway Orthology biological process
cellular response to organic substance Orthology biological process
transcription factor activity, sequence-specific DNA binding Orthology molecular function
cellular response to stress Orthology biological process
intracellular organelle part Orthology cellular component
endosome Orthology cellular component
cell-cell signaling Orthology biological process
intracellular transport Orthology biological process
peptidase activity, acting on L-amino acid peptides Orthology molecular function
negative regulation of signal transduction Orthology biological process
cytoplasmic vesicle Orthology cellular component
proteolysis Orthology biological process
ion transport Orthology biological process
immune response Orthology biological process
cellular response to DNA damage stimulus Orthology biological process
mRNA catabolic process Orthology biological process
endoplasmic reticulum part Orthology cellular component
microtubule-based movement Orthology biological process
anatomical structure morphogenesis Orthology biological process
animal organ development Orthology biological process
regulation of cellular metabolic process Orthology biological process
regulation of cell death Orthology biological process
immune system process Orthology biological process
cell differentiation Orthology biological process

GO (Orthology)

89 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
G2/M transition of mitotic cell cycle Hs biological process
negative regulation of transcription from RNA polymerase II promoter Hs biological process
MAPK cascade Hs biological process
activation of MAPK activity Hs biological process
protein polyubiquitination Hs biological process
nucleotide-excision repair, DNA damage recognition Hs biological process
protease binding Hs molecular function
MyD88-dependent toll-like receptor signaling pathway Hs biological process
MyD88-independent toll-like receptor signaling pathway Hs biological process
RNA binding Hs molecular function
protein binding Hs molecular function
extracellular space Hs cellular component
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
mitochondrial outer membrane Hs cellular component
endoplasmic reticulum membrane Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
glycogen biosynthetic process Hs biological process
transcription-coupled nucleotide-excision repair Hs biological process
nucleotide-excision repair, DNA incision, 5'-to lesion Hs biological process
nucleotide-excision repair, DNA gap filling Hs biological process
protein folding Hs biological process
cellular iron ion homeostasis Hs biological process
transforming growth factor beta receptor signaling pathway Hs biological process
Notch signaling pathway Hs biological process
I-kappaB kinase/NF-kappaB signaling Hs biological process
JNK cascade Hs biological process
fibroblast growth factor receptor signaling pathway Hs biological process
endosome membrane Hs cellular component
negative regulation of G2/M transition of mitotic cell cycle Hs biological process
Wnt signaling pathway Hs biological process
endosomal transport Hs biological process
macroautophagy Hs biological process
protein ubiquitination Hs biological process
protein deubiquitination Hs biological process
cytokine-mediated signaling pathway Hs biological process
translesion synthesis Hs biological process
negative regulation of transforming growth factor beta receptor signaling pathway Hs biological process
endocytic vesicle membrane Hs cellular component
anaphase-promoting complex-dependent catabolic process Hs biological process
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process Hs biological process
positive regulation of protein ubiquitination Hs biological process
vesicle Hs cellular component
negative regulation of type I interferon production Hs biological process
tumor necrosis factor-mediated signaling pathway Hs biological process
nucleotide-excision repair, DNA incision Hs biological process
ion transmembrane transport Hs biological process
TRIF-dependent toll-like receptor signaling pathway Hs biological process
interstrand cross-link repair Hs biological process
NIK/NF-kappaB signaling Hs biological process
Fc-epsilon receptor signaling pathway Hs biological process
negative regulation of epidermal growth factor receptor signaling pathway Hs biological process
error-prone translesion synthesis Hs biological process
DNA damage response, detection of DNA damage Hs biological process
neuron projection Hs cellular component
neuronal cell body Hs cellular component
positive regulation of apoptotic process Hs biological process
negative regulation of apoptotic process Hs biological process
positive regulation of I-kappaB kinase/NF-kappaB signaling Hs biological process
proteasome-mediated ubiquitin-dependent protein catabolic process Hs biological process
myelin sheath Hs cellular component
regulation of mRNA stability Hs biological process
host cell Hs cellular component
endoplasmic reticulum quality control compartment Hs cellular component
innate immune response Hs biological process
positive regulation of epidermal growth factor receptor signaling pathway Hs biological process
negative regulation of Notch signaling pathway Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
mitochondrion transport along microtubule Hs biological process
neuron projection morphogenesis Hs biological process
T cell receptor signaling pathway Hs biological process
positive regulation of NF-kappaB transcription factor activity Hs biological process
stress-activated MAPK cascade Hs biological process
negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle Hs biological process
regulation of mitochondrial membrane potential Hs biological process
transmembrane transport Hs biological process
Wnt signaling pathway, planar cell polarity pathway Hs biological process
membrane organization Hs biological process
regulation of proteasomal protein catabolic process Hs biological process
extracellular exosome Hs cellular component
interleukin-1-mediated signaling pathway Hs biological process
negative regulation of canonical Wnt signaling pathway Hs biological process
positive regulation of canonical Wnt signaling pathway Hs biological process
regulation of neuron death Hs biological process
regulation of hematopoietic stem cell differentiation Hs biological process
positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator Hs biological process

GO (Blast)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protease binding Hs molecular function 1307 0.0
RNA binding Hs molecular function 1307 0.0
structural constituent of ribosome Hs molecular function 151 1.81e-42
protein binding Hs molecular function 1307 0.0
extracellular space Hs cellular component 1307 0.0
nucleus Hs cellular component 1307 0.0
nucleoplasm Hs cellular component 1307 0.0
nucleolus Hs cellular component 151 1.81e-42
cytoplasm Hs cellular component 1307 0.0
mitochondrion Hs cellular component 439 5.92e-151
mitochondrial outer membrane Hs cellular component 1307 0.0
endoplasmic reticulum membrane Hs cellular component 1307 0.0
cytosol Hs cellular component 1307 0.0
ribosome Hs cellular component 151 1.81e-42
plasma membrane Hs cellular component 1307 0.0
endosome membrane Hs cellular component 1307 0.0
small ribosomal subunit Hs cellular component 151 1.81e-42
membrane Hs cellular component 151 1.81e-42
cytosolic small ribosomal subunit Hs cellular component 151 1.81e-42
intracellular ribonucleoprotein complex Hs cellular component 151 1.81e-42
endocytic vesicle membrane Hs cellular component 1307 0.0
vesicle Hs cellular component 1307 0.0
neuron projection Hs cellular component 439 5.92e-151
neuronal cell body Hs cellular component 439 5.92e-151
myelin sheath Hs cellular component 1307 0.0
host cell Hs cellular component 1307 0.0
endoplasmic reticulum quality control compartment Hs cellular component 1307 0.0
metal ion binding Hs molecular function 151 1.81e-42
extracellular exosome Hs cellular component 1307 0.0

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SMART molecular function 2.0E-34