Aniseed - Gene card

External Database Gene Card

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No result

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cigd015b09

Plate: R1CiGC41c20

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
AAA+_ATPase	SMART	AAA+ ATPase domain
NVL2_nucleolin-bd	Pfam	NVL2, nucleolin binding domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
ATPase_AAA_core	Pfam	ATPase, AAA-type, core
NLV2_N_sf	Gene3D	NVL2, N-terminal domain superfamily
ATPase_AAA_CS	ProSitePatterns	ATPase, AAA-type, conserved site

GOSlim

43 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
RNA binding	Orthology	molecular function
receptor binding	Blast	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
extracellular region	Blast	cellular component
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Blast	cellular component
mitochondrion	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
endoplasmic reticulum membrane	Blast	cellular component
cytosol	Blast	cellular component
membrane	Orthology	cellular component
hydrolase activity	Blast	molecular function
ubiquitin protein ligase binding	Blast	molecular function
macromolecular complex	Orthology	cellular component
identical protein binding	Blast	molecular function
myelin sheath	Blast	cellular component
intracellular membrane-bounded organelle	Blast	cellular component
ubiquitin-like protein ligase binding	Blast	molecular function
perinuclear region of cytoplasm	Blast	cellular component
extracellular exosome	Blast	cellular component
nuclear part	Orthology	cellular component
macromolecular complex binding	Orthology	molecular function
intracellular part	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
binding	Blast	molecular function
nucleoside-triphosphatase activity	Blast	molecular function
enzyme binding	Blast	molecular function
intracellular organelle part	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
endomembrane system	Blast	cellular component
intracellular organelle lumen	Blast	cellular component
lysosome	Blast	cellular component
vacuolar part	Blast	cellular component
enzyme activator activity	Blast	molecular function
positive regulation of hydrolase activity	Blast	biological process
peptidase activity, acting on L-amino acid peptides	Blast	molecular function
anion binding	Blast	molecular function
adenyl ribonucleotide binding	Blast	molecular function
cytoplasmic part	Blast	cellular component

GO (Orthology)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
telomerase holoenzyme complex	Hs	cellular component
nucleolus	Hs	cellular component
membrane	Hs	cellular component
ribosome biogenesis	Hs	biological process
preribosome binding	Hs	molecular function

GO (Blast)

47 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	723	0.0
proteasome complex	Hs	cellular component	464	9.15e-153
RNA binding	Hs	molecular function	723	0.0
receptor binding	Hs	molecular function	464	9.15e-153
protein binding	Hs	molecular function	723	0.0
ATP binding	Hs	molecular function	723	0.0
extracellular region	Hs	cellular component	464	9.15e-153
nucleus	Hs	cellular component	723	0.0
nucleoplasm	Hs	cellular component	723	0.0
telomerase holoenzyme complex	Hs	cellular component	723	0.0
nucleolus	Hs	cellular component	723	0.0
cytoplasm	Hs	cellular component	464	9.15e-153
mitochondrion	Hs	cellular component	395	1.59e-125
endoplasmic reticulum	Hs	cellular component	464	9.15e-153
endoplasmic reticulum membrane	Hs	cellular component	464	9.15e-153
lipid droplet	Hs	cellular component	464	9.15e-153
cytosol	Hs	cellular component	464	9.15e-153
lipid binding	Hs	molecular function	464	9.15e-153
membrane	Hs	cellular component	723	0.0
hydrolase activity	Hs	molecular function	464	9.15e-153
ATPase activity	Hs	molecular function	464	9.15e-153
protein phosphatase binding	Hs	molecular function	464	9.15e-153
protein domain specific binding	Hs	molecular function	464	9.15e-153
polyubiquitin modification-dependent protein binding	Hs	molecular function	464	9.15e-153
ubiquitin protein ligase binding	Hs	molecular function	464	9.15e-153
macromolecular complex	Hs	cellular component	464	9.15e-153
VCP-NPL4-UFD1 AAA ATPase complex	Hs	cellular component	464	9.15e-153
secretory granule lumen	Hs	cellular component	464	9.15e-153
azurophil granule lumen	Hs	cellular component	464	9.15e-153
deubiquitinase activator activity	Hs	molecular function	464	9.15e-153
site of double-strand break	Hs	cellular component	464	9.15e-153
K48-linked polyubiquitin modification-dependent protein binding	Hs	molecular function	464	9.15e-153
Derlin-1 retrotranslocation complex	Hs	cellular component	464	9.15e-153
MHC class I protein binding	Hs	molecular function	464	9.15e-153
identical protein binding	Hs	molecular function	464	9.15e-153
myelin sheath	Hs	cellular component	464	9.15e-153
intracellular membrane-bounded organelle	Hs	cellular component	464	9.15e-153
ADP binding	Hs	molecular function	464	9.15e-153
ubiquitin-like protein ligase binding	Hs	molecular function	464	9.15e-153
perinuclear region of cytoplasm	Hs	cellular component	464	9.15e-153
extracellular exosome	Hs	cellular component	464	9.15e-153
BAT3 complex binding	Hs	molecular function	464	9.15e-153
ficolin-1-rich granule lumen	Hs	cellular component	464	9.15e-153
ATPase complex	Hs	cellular component	464	9.15e-153
preribosome binding	Hs	molecular function	723	0.0
ubiquitin-specific protease binding	Hs	molecular function	464	9.15e-153
VCP-NSFL1C complex	Hs	cellular component	464	9.15e-153

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
ATP binding	Pfam	molecular function	1.4E-47

Gene Card

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Transcript Models and Sequences