Gene Card
Best human hits
FTSJ1; FTSJ3; MRM2
Unique Gene ID
Cirobu.g00010814
Gene Model ID
KH2012:KH.L116.80
Location
KhL116:196563..200666
Transcript Models and Sequences
KH2012:KH.L116.80.v1.A.ND1-1
KH2012:KH.L116.80.v1.A.nonSL2-1
KH2012:KH.L116.80.v1.A.nonSL3-1
External database links
3 results
Gateway full ORF
3 results
Gene collection 1 (N. Satoh)
1 result
cieg039h04
Plate: R1CiGC21f02
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
4 results
| IPR Term | Analysis | Definition |
|---|---|---|
| rRNA_MeTrfase_FtsJ_dom | Pfam | Ribosomal RNA methyltransferase FtsJ domain |
| rRNA-MeTfrase_E | PIRSF | Ribosomal RNA large subunit methyltransferase E |
| rRNA-MeTfrase_E | Hamap | Ribosomal RNA large subunit methyltransferase E |
| SAM-dependent_MTases | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferase |
GOSlim
14 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleolus | Orthology | cellular component |
| cytoplasm | Blast | cellular component |
| mitochondrion | Orthology | cellular component |
| mitochondrial matrix | Orthology | cellular component |
| cytosol | Blast | cellular component |
| cell proliferation | Orthology | biological process |
| transferase activity | Orthology | molecular function |
| RNA metabolic process | Orthology | biological process |
| RNA processing | Orthology | biological process |
| metabolic process | Orthology | biological process |
| macromolecular complex | Blast | cellular component |
GO (Orthology)
11 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| RNA methylation | Hs | biological process |
| nucleolus | Hs | cellular component |
| mitochondrion | Hs | cellular component |
| mitochondrial matrix | Hs | cellular component |
| rRNA processing | Hs | biological process |
| methyltransferase activity | Hs | molecular function |
| cell proliferation | Hs | biological process |
| rRNA (uridine-2'-O-)-methyltransferase activity | Hs | molecular function |
| transferase activity | Hs | molecular function |
| rRNA methylation | Hs | biological process |
| methylation | Hs | biological process |
GO (Blast)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA binding | Hs | molecular function | 99.4 | 9.61e-24 |
| protein binding | Hs | molecular function | 99.4 | 9.61e-24 |
| nucleus | Hs | cellular component | 99.4 | 9.61e-24 |
| nucleolus | Hs | cellular component | 160 | 6.71e-49 |
| cytoplasm | Hs | cellular component | 127 | 6.52e-35 |
| mitochondrion | Hs | cellular component | 160 | 6.71e-49 |
| mitochondrial matrix | Hs | cellular component | 160 | 6.71e-49 |
| cytosol | Hs | cellular component | 127 | 6.52e-35 |
| methyltransferase activity | Hs | molecular function | 160 | 6.71e-49 |
| tRNA methyltransferase activity | Hs | molecular function | 127 | 6.52e-35 |
| rRNA methyltransferase activity | Hs | molecular function | 99.4 | 9.61e-24 |
| rRNA (uridine-2'-O-)-methyltransferase activity | Hs | molecular function | 160 | 6.71e-49 |
| tRNA (guanosine-2'-O-)-methyltransferase activity | Hs | molecular function | 127 | 6.52e-35 |
| rRNA (guanine) methyltransferase activity | Hs | molecular function | 99.4 | 9.61e-24 |
| transferase activity | Hs | molecular function | 160 | 6.71e-49 |
| preribosome, large subunit precursor | Hs | cellular component | 99.4 | 9.61e-24 |
| tRNA (cytosine-2'-O-)-methyltransferase activity | Hs | molecular function | 127 | 6.52e-35 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| RNA methylation | PIRSF | biological process | 3.9E-63 |
| methyltransferase activity | PIRSF | molecular function | 3.9E-63 |
| methylation | Pfam | biological process | 3.0E-55 |
