Aniseed - Gene card

Gene Card

Best human hits

NME5; NME6; NME7

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010903

Gene Model ID

KH2012:KH.L122.9

Location

KhL122:84841..86280

Transcript Models and Sequences

KH2012:KH.L122.9.v1.A.ND1-1
KH2012:KH.L122.9.v1.A.nonSL2-1
KH2012:KH.L122.9.v1.A.nonSL3-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000015967
NCBI Reference Sequence	XM_002129693.3

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg054i14

Plate: R1CiGC24o21

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Nucleoside_diP_kinase_AS	ProSitePatterns	Nucleoside diphosphate kinase, active site
Nucleoside_diP_kinase	PRINTS	Nucleoside diphosphate kinase
NDK-like_dom_sf	Gene3D	Nucleoside diphosphate kinase-like domain superfamily
NDK-like_dom_sf	SUPERFAMILY	Nucleoside diphosphate kinase-like domain superfamily
Methyltransf_11	Pfam	Methyltransferase type 11
NDK-like_dom	SMART	Nucleoside diphosphate kinase-like domain
NDK-like_dom	Pfam	Nucleoside diphosphate kinase-like domain
SAM-dependent_MTases	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferase

GOSlim

21 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
protein binding	Blast	molecular function
ATP binding	Orthology	molecular function
intracellular	Blast	cellular component
mitochondrion	Orthology	cellular component
centrosome	Blast	cellular component
cytosol	Orthology	cellular component
apoptotic process	Orthology	biological process
kinase activity	Orthology	molecular function
phosphorylation	Orthology	biological process
transferase activity	Orthology	molecular function
metal ion binding	Orthology	molecular function
metabolic process	InterProScan	biological process
nucleobase-containing compound metabolic process	Orthology	biological process
phosphate-containing compound metabolic process	Orthology	biological process
cellular component organization	Orthology	biological process
cell projection part	Blast	cellular component
microtubule	Blast	cellular component
macromolecular complex	Blast	cellular component
cytoplasmic part	Blast	cellular component
plasma membrane region	Blast	cellular component

GO (Orthology)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
nucleoside diphosphate kinase activity	Hs	molecular function
ATP binding	Hs	molecular function
mitochondrion	Hs	cellular component
cytosol	Hs	cellular component
nucleoside diphosphate phosphorylation	Hs	biological process
GTP biosynthetic process	Hs	biological process
UTP biosynthetic process	Hs	biological process
CTP biosynthetic process	Hs	biological process
apoptotic process	Hs	biological process
nucleotide metabolic process	Hs	biological process
kinase activity	Hs	molecular function
phosphorylation	Hs	biological process
transferase activity	Hs	molecular function
negative regulation of cell growth	Hs	biological process
negative regulation of mitotic nuclear division	Hs	biological process
metal ion binding	Hs	molecular function

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	148	4.36e-43
nucleoside diphosphate kinase activity	Hs	molecular function	148	4.36e-43
protein binding	Hs	molecular function	96.7	2.57e-23
ATP binding	Hs	molecular function	148	4.36e-43
intracellular	Hs	cellular component	96.7	2.57e-23
mitochondrion	Hs	cellular component	148	4.36e-43
centrosome	Hs	cellular component	87.8	4.18e-19
cytosol	Hs	cellular component	148	4.36e-43
kinase activity	Hs	molecular function	148	4.36e-43
transferase activity	Hs	molecular function	148	4.36e-43
sperm flagellum	Hs	cellular component	96.7	2.57e-23
metal ion binding	Hs	molecular function	148	4.36e-43

GO (InterProScan)

7 results

GO Term	Analysis	Type	e-value
nucleoside diphosphate kinase activity	PRINTS	molecular function	5.1E-10
nucleoside diphosphate phosphorylation	PRINTS	biological process	5.1E-10
GTP biosynthetic process	PRINTS	biological process	5.1E-10
UTP biosynthetic process	PRINTS	biological process	5.1E-10
CTP biosynthetic process	PRINTS	biological process	5.1E-10
metabolic process	Pfam	biological process	1.1E-10
methyltransferase activity	Pfam	molecular function	1.1E-10