Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000008186

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

2 results

ciad075i04

Plate: R1CiGC07o24

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
PyrdxlP-dep_Trfase_dom1	Gene3D	Pyridoxal phosphate-dependent transferase domain 1
PyrdxlP-dep_Trfase	SUPERFAMILY	Pyridoxal phosphate-dependent transferase
Ser_HO-MeTrfase	CDD	Serine hydroxymethyltransferase
Ser_HO-MeTrfase_PLP_BS	ProSitePatterns	Serine hydroxymethyltransferase, pyridoxal phosphate binding site
Ser_HO-MeTrfase	PIRSF	Serine hydroxymethyltransferase
Ser_HO-MeTrfase	Hamap	Serine hydroxymethyltransferase
PyrdxlP-dep_Trfase_major	Gene3D	Pyridoxal phosphate-dependent transferase, major domain

GOSlim

38 results

GO Term	Annotation Origin	Type
chromatin binding	Blast	molecular function
catalytic activity	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Blast	cellular component
mitochondrial matrix	Blast	cellular component
cytosol	Orthology	cellular component
microtubule cytoskeleton	Blast	cellular component
membrane	Blast	cellular component
transferase activity	Orthology	molecular function
identical protein binding	Orthology	molecular function
protein homodimerization activity	Orthology	molecular function
extracellular exosome	Orthology	cellular component
negative regulation of gene expression	Orthology	biological process
nucleic acid binding	Orthology	molecular function
peptidase activity, acting on L-amino acid peptides	Orthology	molecular function
phosphate-containing compound metabolic process	Orthology	biological process
cellular metabolic process	Orthology	biological process
cellular biosynthetic process	Orthology	biological process
nucleobase-containing compound metabolic process	Orthology	biological process
small molecule binding	Orthology	molecular function
anion binding	Orthology	molecular function
heterocyclic compound binding	Orthology	molecular function
organic cyclic compound binding	Orthology	molecular function
coenzyme binding	Orthology	molecular function
cellular aromatic compound metabolic process	Orthology	biological process
RNA binding	Orthology	molecular function
protein oligomerization	Orthology	biological process
protein homooligomerization	Orthology	biological process
cation binding	Orthology	molecular function
mitochondrial envelope	Blast	cellular component
intracellular organelle lumen	Blast	cellular component
metabolic process	Blast	biological process
intracellular non-membrane-bounded organelle	Blast	cellular component
nuclear part	Blast	cellular component
macromolecular complex	Blast	cellular component

GO (Orthology)

33 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
translation repressor activity, nucleic acid binding	Hs	molecular function
catalytic activity	Hs	molecular function
glycine hydroxymethyltransferase activity	Hs	molecular function
thiol-dependent ubiquitin-specific protease activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
cytosol	Hs	cellular component
dTMP biosynthetic process	Hs	biological process
glycine metabolic process	Hs	biological process
glycine biosynthetic process	Hs	biological process
L-serine metabolic process	Hs	biological process
one-carbon metabolic process	Hs	biological process
L-allo-threonine aldolase activity	Hs	molecular function
purine nucleobase biosynthetic process	Hs	biological process
protein deubiquitination	Hs	biological process
amino acid binding	Hs	molecular function
transferase activity	Hs	molecular function
negative regulation of translation	Hs	biological process
glycine biosynthetic process from serine	Hs	biological process
pyridoxal phosphate binding	Hs	molecular function
tetrahydrofolate interconversion	Hs	biological process
identical protein binding	Hs	molecular function
protein homodimerization activity	Hs	molecular function
carnitine biosynthetic process	Hs	biological process
tetrahydrofolate metabolic process	Hs	biological process
folic acid metabolic process	Hs	biological process
mRNA 5'-UTR binding	Hs	molecular function
protein tetramerization	Hs	biological process
protein homotetramerization	Hs	biological process
extracellular exosome	Hs	cellular component
serine binding	Hs	molecular function

GO (Blast)

27 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
translation repressor activity, nucleic acid binding	Hs	molecular function	655
chromatin binding	Hs	molecular function	596
catalytic activity	Hs	molecular function	655
glycine hydroxymethyltransferase activity	Hs	molecular function	655
thiol-dependent ubiquitin-specific protease activity	Hs	molecular function	655
protein binding	Hs	molecular function	655
nucleus	Hs	cellular component	655
cytoplasm	Hs	cellular component	655
mitochondrion	Hs	cellular component	655
mitochondrial inner membrane	Hs	cellular component	596
mitochondrial intermembrane space	Hs	cellular component	596
mitochondrial matrix	Hs	cellular component	596
cytosol	Hs	cellular component	655
methyltransferase activity	Hs	molecular function	596
L-allo-threonine aldolase activity	Hs	molecular function	655
microtubule cytoskeleton	Hs	cellular component	596
membrane	Hs	cellular component	596
amino acid binding	Hs	molecular function	655
transferase activity	Hs	molecular function	655
pyridoxal phosphate binding	Hs	molecular function	655
mitochondrial nucleoid	Hs	cellular component	596
identical protein binding	Hs	molecular function	655
protein homodimerization activity	Hs	molecular function	655
mRNA 5'-UTR binding	Hs	molecular function	655
extracellular exosome	Hs	cellular component	655
BRISC complex	Hs	cellular component	596
serine binding	Hs	molecular function	655

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
catalytic activity	Gene3D	molecular function	9.6E-209
glycine hydroxymethyltransferase activity	CDD	molecular function	0.0
glycine biosynthetic process from serine	CDD	biological process	0.0
pyridoxal phosphate binding	CDD	molecular function	0.0
tetrahydrofolate interconversion	CDD	biological process	0.0

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Gateway full ORF

cima891964

cien133477

cien199593

cien220541