Aniseed - Gene card

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000005788
ENSEMBL	ENSCING00000019467
NCBI Reference Sequence	XM_002129812.3
NCBI Reference Sequence	XM_018815224.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cicl004i20

Plate: R1CiGC08p15

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

8 results

Cirobu.REG.KH2012.L13:46690-48871|KH.L13.2 REG00001285 [ regulatory_region (complex_region) ]
- Cirobu.REG.KH2012.L13:46690-48440|KH.L13.2 REG00001286 [ regulatory_region (extended_promoter) ]
  - Cirobu.REG.KH2012.L13:46690-47600|KH.L13.2 REG00001288 [ regulatory_region (complex_region) ]
    - Cirobu.REG.KH2012.L13:47071-47600|KH.L13.2 REG00001289 [ regulatory_region (enhancer) ]
- Cirobu.REG.KH2012.L13:48441-48871|KH.L13.2 REG00001287 [ no_output ]

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
LDrepeatLR_classA_rpt	ProSiteProfiles	Low-density lipoprotein (LDL) receptor class A repeat
LDrepeatLR_classA_rpt	CDD	Low-density lipoprotein (LDL) receptor class A repeat
LDrepeatLR_classA_rpt	PRINTS	Low-density lipoprotein (LDL) receptor class A repeat
LDL_receptor-like_sf	SUPERFAMILY	LDL receptor-like superfamily
EGF-like_CS	ProSitePatterns	EGF-like, conserved site
LDrepeatLR_classA_rpt	Pfam	Low-density lipoprotein (LDL) receptor class A repeat
EGF-like_dom	SMART	EGF-like domain
LDLR_class-A_CS	ProSitePatterns	Low-density lipoprotein (LDL) receptor class A, conserved site
EGF-like_dom	ProSiteProfiles	EGF-like domain
LDrepeatLR_classA_rpt	SMART	Low-density lipoprotein (LDL) receptor class A repeat

GOSlim

48 results

GO Term	Annotation Origin	Type
serine-type endopeptidase activity	Blast	molecular function
calcium ion binding	Blast	molecular function
protein binding	Blast	molecular function
extracellular region	Blast	cellular component
extracellular space	Blast	cellular component
lysosome	Blast	cellular component
lysosomal membrane	Blast	cellular component
endosome	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
Golgi apparatus	Blast	cellular component
plasma membrane	Blast	cellular component
brush border	Blast	cellular component
focal adhesion	Blast	cellular component
protein C-terminus binding	Blast	molecular function
peptidase activity	Blast	molecular function
serine-type peptidase activity	Blast	molecular function
cell surface	Blast	cellular component
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
apical plasma membrane	Blast	cellular component
nuclear body	Blast	cellular component
hydrolase activity	Blast	molecular function
axon	Blast	cellular component
brush border membrane	Blast	cellular component
cell projection	Blast	cellular component
apical part of cell	Blast	cellular component
metal ion binding	Blast	molecular function
membrane organization	Blast	biological process
extracellular exosome	Blast	cellular component
organelle organization	Blast	biological process
macromolecular complex binding	Blast	molecular function
extracellular region part	Blast	cellular component
Golgi apparatus part	Blast	cellular component
intracellular organelle lumen	Blast	cellular component
membrane part	Blast	cellular component
endomembrane system	Blast	cellular component
binding	Blast	molecular function
plasma membrane part	Blast	cellular component
cytoskeleton	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
intracellular organelle part	Blast	cellular component
whole membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
receptor binding	Blast	molecular function
transcription factor binding	Blast	molecular function
protein transport	Blast	biological process
vacuolar part	Blast	cellular component
macromolecular complex	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

49 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
serine-type endopeptidase activity	Hs	molecular function	70.1	1.60e-12
low-density lipoprotein receptor activity	Hs	molecular function	68.2	9.75e-12
calcium ion binding	Hs	molecular function	72.0	6.20e-13
protein binding	Hs	molecular function	72.0	6.20e-13
extracellular region	Hs	cellular component	72.0	6.20e-13
proteinaceous extracellular matrix	Hs	cellular component	72.0	6.20e-13
basement membrane	Hs	cellular component	72.0	6.20e-13
extracellular space	Hs	cellular component	72.0	6.20e-13
lysosome	Hs	cellular component	68.2	9.75e-12
lysosomal membrane	Hs	cellular component	68.2	9.75e-12
endosome	Hs	cellular component	68.2	9.75e-12
endoplasmic reticulum	Hs	cellular component	68.2	9.75e-12
Golgi apparatus	Hs	cellular component	68.2	9.75e-12
Golgi lumen	Hs	cellular component	72.0	6.20e-13
plasma membrane	Hs	cellular component	72.0	6.20e-13
brush border	Hs	cellular component	68.2	9.75e-12
clathrin-coated pit	Hs	cellular component	68.2	9.75e-12
focal adhesion	Hs	cellular component	72.0	6.20e-13
protein C-terminus binding	Hs	molecular function	72.0	6.20e-13
drug binding	Hs	molecular function	68.2	9.75e-12
peptidase activity	Hs	molecular function	70.1	1.60e-12
serine-type peptidase activity	Hs	molecular function	70.1	1.60e-12
external side of plasma membrane	Hs	cellular component	68.2	9.75e-12
cell surface	Hs	cellular component	70.1	1.60e-12
actin cytoskeleton	Hs	cellular component	70.1	1.60e-12
membrane	Hs	cellular component	70.1	1.60e-12
integral component of membrane	Hs	cellular component	70.1	1.60e-12
apical plasma membrane	Hs	cellular component	68.2	9.75e-12
nuclear body	Hs	cellular component	70.1	1.60e-12
hydrolase activity	Hs	molecular function	70.1	1.60e-12
SH3 domain binding	Hs	molecular function	68.2	9.75e-12
endocytic vesicle	Hs	cellular component	68.2	9.75e-12
axon	Hs	cellular component	68.2	9.75e-12
dendrite	Hs	cellular component	68.2	9.75e-12
clathrin-coated vesicle membrane	Hs	cellular component	68.2	9.75e-12
extracellular matrix	Hs	cellular component	72.0	6.20e-13
brush border membrane	Hs	cellular component	68.2	9.75e-12
endosome lumen	Hs	cellular component	68.2	9.75e-12
steroid hormone receptor binding	Hs	molecular function	68.2	9.75e-12
lipoprotein transporter activity	Hs	molecular function	68.2	9.75e-12
cell projection	Hs	cellular component	68.2	9.75e-12
lysosomal lumen	Hs	cellular component	72.0	6.20e-13
receptor complex	Hs	cellular component	68.2	9.75e-12
apical part of cell	Hs	cellular component	68.2	9.75e-12
metal ion binding	Hs	molecular function	72.0	6.20e-13
low-density lipoprotein particle receptor binding	Hs	molecular function	72.0	6.20e-13
chaperone binding	Hs	molecular function	68.2	9.75e-12
extracellular exosome	Hs	cellular component	72.0	6.20e-13
plasma membrane protein complex	Hs	cellular component	72.0	6.20e-13

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	CDD	molecular function	2.90605E-8

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences