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GENE CARD

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Gene Card

Best human hits

KTN1; RRBP1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010999

Gene Model ID

KH2012:KH.L13.3

Location

KhL13:140374..151374

Transcript Models and Sequences

  KH2012:KH.L13.3.v1.A.SL1-1
KH2012:KH.L13.3.v1.A.SL2-1
KH2012:KH.L13.3.v2.A.SL1-1
KH2012:KH.L13.3.v2.A.SL2-1
KH2012:KH.L13.3.v3.A.SL1-1
KH2012:KH.L13.3.v3.A.SL2-1
KH2012:KH.L13.3.v4.A.SL1-1
KH2012:KH.L13.3.v4.A.SL2-1
KH2012:KH.L13.3.v5.A.SL1-1
KH2012:KH.L13.3.v5.A.SL2-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000001112
Collections

Gateway full ORF

2 results

cien60594

Plate: VES79_N18

cien121772

Plate: VES89_J08

Gene collection 1 (N. Satoh)

5 results

citb3g7

Plate: R1CiGC28p14

cicl025p19

Plate: R1CiGC11n07

cicl031o09

Plate: R1CiGC12m08

ciad055n10

Plate: R1CiGC05d14

cieg036f10

Plate: R1CiGC21g02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

No result

IPR Term Analysis Definition

GOSlim

15 results

GO Term Annotation Origin Type
RNA binding Orthology molecular function
protein binding Orthology molecular function
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum lumen Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
ribosome Orthology cellular component
integral component of plasma membrane Orthology cellular component
microtubule-based movement Orthology biological process
protein transport Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
cell differentiation Orthology biological process
cytoskeletal protein binding Orthology molecular function
cellular protein modification process Orthology biological process
cell adhesion molecule binding Orthology molecular function

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
osteoblast differentiation Hs biological process
RNA binding Hs molecular function
receptor activity Hs molecular function
protein binding Hs molecular function
endoplasmic reticulum Hs cellular component
endoplasmic reticulum lumen Hs cellular component
endoplasmic reticulum membrane Hs cellular component
ribosome Hs cellular component
integral component of plasma membrane Hs cellular component
translation Hs biological process
microtubule-based movement Hs biological process
protein transport Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
kinesin binding Hs molecular function
integral component of endoplasmic reticulum membrane Hs cellular component
post-translational protein modification Hs biological process
cadherin binding Hs molecular function

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA binding Hs molecular function 95.5 9.22e-20
receptor activity Hs molecular function 95.5 9.22e-20
protein binding Hs molecular function 67.4 3.28e-11
endoplasmic reticulum Hs cellular component 95.5 9.22e-20
endoplasmic reticulum lumen Hs cellular component 67.4 3.28e-11
endoplasmic reticulum membrane Hs cellular component 95.5 9.22e-20
ribosome Hs cellular component 95.5 9.22e-20
integral component of plasma membrane Hs cellular component 67.4 3.28e-11
membrane Hs cellular component 95.5 9.22e-20
integral component of membrane Hs cellular component 95.5 9.22e-20
kinesin binding Hs molecular function 67.4 3.28e-11
integral component of endoplasmic reticulum membrane Hs cellular component 95.5 9.22e-20
cadherin binding Hs molecular function 67.4 3.28e-11

GO (InterProScan)

No result

GO Term Analysis Type e-value

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