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Gene Card

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Gateway full ORF

2 results

cien96607

Plate: VES85_H12

cien229560

Plate: VES105_N14

Gene collection 1 (N. Satoh)

5 results

ciad001a03

Plate: R1CiGC01a01

cieg002d02

Plate: R1CiGC15p03

cieg022d08

Plate: R1CiGC18n22

cilv038m05

Plate: R1CiGC28m11

cits034h24

Plate: R1CiGC34g24

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

14 results

IPR Term Analysis Definition
RNA-helicase_DEAD-box_CS ProSitePatterns ATP-dependent RNA helicase DEAD-box, conserved site
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
Helicase_C Pfam Helicase, C-terminal
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Helicase_C CDD Helicase, C-terminal
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
DEAD/DEAH_box_helicase_dom Pfam DEAD/DEAH box helicase domain
Helicase_C SMART Helicase, C-terminal
Znf_CCHC ProSiteProfiles Zinc finger, CCHC-type
Znf_CCHC SMART Zinc finger, CCHC-type
Helicase_C ProSiteProfiles Helicase, C-terminal
Znf_CCHC Pfam Zinc finger, CCHC-type
Znf_CCHC_sf SUPERFAMILY Zinc finger, CCHC-type superfamily
RNA_helicase_DEAD_Q_motif ProSiteProfiles RNA helicase, DEAD-box type, Q motif

GOSlim

49 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
nucleic acid binding Orthology molecular function
DNA binding Blast molecular function
RNA binding Blast molecular function
GTPase activity Blast molecular function
protein binding Blast molecular function
ATP binding Orthology molecular function
extracellular region Blast cellular component
nucleus Blast cellular component
nucleolus Orthology cellular component
cytoplasm Orthology cellular component
mitochondrion Blast cellular component
cytosol Blast cellular component
multicellular organism development Orthology biological process
spermatogenesis Orthology biological process
transcription factor binding Blast molecular function
membrane Blast cellular component
nuclear speck Blast cellular component
hydrolase activity Orthology molecular function
nucleoside-triphosphatase activity Orthology molecular function
cell differentiation Orthology biological process
perinuclear region of cytoplasm Orthology cellular component
extracellular exosome Blast cellular component
zinc ion binding InterProScan molecular function
male gamete generation Orthology biological process
RNA metabolic process Orthology biological process
reproductive process Orthology biological process
cell motility Orthology biological process
negative regulation of gene expression Orthology biological process
cellular process Orthology biological process
DNA metabolic process Orthology biological process
gamete generation Orthology biological process
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component
organelle organization Blast biological process
whole membrane Blast cellular component
mitochondrial membrane Blast cellular component
bounding membrane of organelle Blast cellular component
intracellular organelle part Blast cellular component
ribosome Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
intracellular organelle lumen Blast cellular component
macromolecular complex binding Blast molecular function
enzyme activator activity Blast molecular function
protein kinase binding Blast molecular function
protein serine/threonine kinase activity Blast molecular function
cell adhesion molecule binding Blast molecular function

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
nucleic acid binding Hs molecular function
ATP-dependent RNA helicase activity Hs molecular function
helicase activity Hs molecular function
ATP binding Hs molecular function
nucleolus Hs cellular component
cytoplasm Hs cellular component
male meiotic nuclear division Hs biological process
male meiosis I Hs biological process
multicellular organism development Hs biological process
spermatogenesis Hs biological process
RNA secondary structure unwinding Hs biological process
negative regulation of transposition Hs biological process
hydrolase activity Hs molecular function
ATPase activity Hs molecular function
cell differentiation Hs biological process
flagellated sperm motility Hs biological process
gene silencing by RNA Hs biological process
piRNA metabolic process Hs biological process
DNA methylation involved in gamete generation Hs biological process
P granule Hs cellular component
perinuclear region of cytoplasm Hs cellular component
meiotic cell cycle Hs biological process
pi-body Hs cellular component
piP-body Hs cellular component
piRNA biosynthetic process Hs biological process

GO (Blast)

44 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 559 0.0
nucleic acid binding Hs molecular function 559 0.0
DNA binding Hs molecular function 472 8.72e-159
RNA binding Hs molecular function 472 8.72e-159
GTPase activity Hs molecular function 470 2.53e-157
ATP-dependent DNA helicase activity Hs molecular function 470 2.53e-157
ATP-dependent RNA helicase activity Hs molecular function 559 0.0
helicase activity Hs molecular function 559 0.0
protein binding Hs molecular function 470 2.53e-157
ATP binding Hs molecular function 559 0.0
extracellular region Hs cellular component 470 2.53e-157
nucleus Hs cellular component 472 8.72e-159
nucleolus Hs cellular component 559 0.0
cytoplasm Hs cellular component 559 0.0
mitochondrion Hs cellular component 470 2.53e-157
mitochondrial outer membrane Hs cellular component 470 2.53e-157
cytosol Hs cellular component 472 8.72e-159
eukaryotic translation initiation factor 3 complex Hs cellular component 470 2.53e-157
transcription factor binding Hs molecular function 470 2.53e-157
poly(A) binding Hs molecular function 470 2.53e-157
eukaryotic initiation factor 4E binding Hs molecular function 470 2.53e-157
cytoplasmic stress granule Hs cellular component 470 2.53e-157
membrane Hs cellular component 472 8.72e-159
nuclear speck Hs cellular component 470 2.53e-157
hydrolase activity Hs molecular function 559 0.0
ATPase activity Hs molecular function 559 0.0
nucleoside-triphosphatase activity Hs molecular function 470 2.53e-157
cytosolic small ribosomal subunit Hs cellular component 470 2.53e-157
translation initiation factor binding Hs molecular function 470 2.53e-157
RNA strand annealing activity Hs molecular function 470 2.53e-157
secretory granule lumen Hs cellular component 470 2.53e-157
RNA stem-loop binding Hs molecular function 470 2.53e-157
cytoplasmic ribonucleoprotein granule Hs cellular component 472 8.72e-159
ribosomal small subunit binding Hs molecular function 470 2.53e-157
P granule Hs cellular component 559 0.0
CTPase activity Hs molecular function 470 2.53e-157
protein serine/threonine kinase activator activity Hs molecular function 470 2.53e-157
cadherin binding Hs molecular function 470 2.53e-157
mRNA 5'-UTR binding Hs molecular function 470 2.53e-157
perinuclear region of cytoplasm Hs cellular component 559 0.0
extracellular exosome Hs cellular component 470 2.53e-157
pi-body Hs cellular component 559 0.0
piP-body Hs cellular component 559 0.0
ficolin-1-rich granule lumen Hs cellular component 470 2.53e-157

GO (InterProScan)

3 results

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 3.2E-48
ATP binding Pfam molecular function 3.2E-48
zinc ion binding SUPERFAMILY molecular function 7.43E-13