Gene Card
Best human hits
RNF139; RNF145; SYVN1
Unique Gene ID
Cirobu.g00011114
Gene Model ID
KH2012:KH.L137.2
Location
KhL137:36549..45718
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000010294 |
| NCBI Reference Sequence | XM_002124266.4 |
Gateway full ORF
1 result
cima85833
Plate: VES57_M01
Gene collection 1 (N. Satoh)
1 result
citb039j01
Plate: R1CiGC32p19
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Znf_RING/FYVE/PHD | Gene3D | Zinc finger, RING/FYVE/PHD-type |
| TRC8_N_dom | Pfam | TRC8 N-terminal domain |
| Znf_RING | Pfam | Zinc finger, RING-type |
| Znf_RING | ProSiteProfiles | Zinc finger, RING-type |
| Znf_RING | SMART | Zinc finger, RING-type |
GOSlim
18 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| protein polyubiquitination | Orthology | biological process |
| ubiquitin-protein transferase activity | Orthology | molecular function |
| protein binding | Blast | molecular function |
| nucleoplasm | Blast | cellular component |
| endoplasmic reticulum | Blast | cellular component |
| endoplasmic reticulum membrane | Blast | cellular component |
| zinc ion binding | Orthology | molecular function |
| membrane | Orthology | cellular component |
| integral component of membrane | Orthology | cellular component |
| transferase activity | Blast | molecular function |
| ligase activity | Blast | molecular function |
| ubiquitin-like protein transferase activity | Blast | molecular function |
| metal ion binding | Orthology | molecular function |
| unfolded protein binding | Blast | molecular function |
| proteolysis | Orthology | biological process |
| macromolecular complex | Blast | cellular component |
| enzyme binding | Blast | molecular function |
| endoplasmic reticulum part | Blast | cellular component |
GO (Orthology)
7 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| protein polyubiquitination | Hs | biological process |
| zinc ion binding | Hs | molecular function |
| membrane | Hs | cellular component |
| integral component of membrane | Hs | cellular component |
| proteasome-mediated ubiquitin-dependent protein catabolic process | Hs | biological process |
| metal ion binding | Hs | molecular function |
| ubiquitin protein ligase activity | Hs | molecular function |
GO (Blast)
26 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| Hrd1p ubiquitin ligase complex | Hs | cellular component | 62.0 | 6.57e-10 |
| Hrd1p ubiquitin ligase ERAD-L complex | Hs | cellular component | 62.0 | 6.57e-10 |
| protease binding | Hs | molecular function | 154 | 8.76e-40 |
| ubiquitin-protein transferase activity | Hs | molecular function | 154 | 8.76e-40 |
| receptor activity | Hs | molecular function | 154 | 8.76e-40 |
| protein binding | Hs | molecular function | 154 | 8.76e-40 |
| nucleoplasm | Hs | cellular component | 62.0 | 6.57e-10 |
| endoplasmic reticulum | Hs | cellular component | 154 | 8.76e-40 |
| endoplasmic reticulum membrane | Hs | cellular component | 154 | 8.76e-40 |
| smooth endoplasmic reticulum | Hs | cellular component | 62.0 | 6.57e-10 |
| zinc ion binding | Hs | molecular function | 201 | 4.81e-56 |
| membrane | Hs | cellular component | 201 | 4.81e-56 |
| integral component of membrane | Hs | cellular component | 201 | 4.81e-56 |
| transferase activity | Hs | molecular function | 154 | 8.76e-40 |
| ligase activity | Hs | molecular function | 154 | 8.76e-40 |
| ubiquitin-like protein transferase activity | Hs | molecular function | 154 | 8.76e-40 |
| integral component of endoplasmic reticulum membrane | Hs | cellular component | 62.0 | 6.57e-10 |
| Derlin-1 retrotranslocation complex | Hs | cellular component | 154 | 8.76e-40 |
| endoplasmic reticulum quality control compartment | Hs | cellular component | 154 | 8.76e-40 |
| metal ion binding | Hs | molecular function | 201 | 4.81e-56 |
| unfolded protein binding | Hs | molecular function | 62.0 | 6.57e-10 |
| chaperone binding | Hs | molecular function | 62.0 | 6.57e-10 |
| ATPase binding | Hs | molecular function | 62.0 | 6.57e-10 |
| ubiquitin protein ligase activity | Hs | molecular function | 201 | 4.81e-56 |
| ubiquitin protein ligase activity involved in ERAD pathway | Hs | molecular function | 154 | 8.76e-40 |
| ubiquitin-specific protease binding | Hs | molecular function | 62.0 | 6.57e-10 |
| GO Term | Analysis | Type | e-value |
|---|
