Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000023042
NCBI Reference Sequence	XM_002123804.4

Collections

Gateway full ORF

1 result

cien85835

Plate: VES83_F19

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

1 results

Ci-Emx -525/-111 REG00000360 [ inactive_region ]

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Homeobox_metazoa	PRINTS	Homeobox domain, metazoa
Homeobox_dom	Pfam	Homeobox domain
Homeobox-like_sf	SUPERFAMILY	Homeobox-like domain superfamily
Homeobox_dom	CDD	Homeobox domain
Homeobox_dom	SMART	Homeobox domain
Homeobox_CS	ProSitePatterns	Homeobox, conserved site
Homeobox_dom	ProSiteProfiles	Homeobox domain

GOSlim

25 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Blast	biological process
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
multicellular organism development	Orthology	biological process
brain development	Orthology	biological process
regulation of gene expression	Orthology	biological process
neuron differentiation	Orthology	biological process
sequence-specific DNA binding	Orthology	molecular function
cell proliferation	Orthology	biological process
cell migration	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
regulation of cell proliferation	Orthology	biological process
cell development	Orthology	biological process
generation of neurons	Orthology	biological process
system development	Orthology	biological process
neuron projection morphogenesis	Orthology	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Blast	molecular function
chromatin binding	Blast	molecular function

GO (Orthology)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
multicellular organism development	Hs	biological process
brain development	Hs	biological process
post-embryonic development	Hs	biological process
anterior/posterior pattern specification	Hs	biological process
regulation of gene expression	Hs	biological process
telencephalon development	Hs	biological process
cell proliferation in forebrain	Hs	biological process
forebrain cell migration	Hs	biological process
cerebral cortex neuron differentiation	Hs	biological process
cerebral cortex development	Hs	biological process
neuron differentiation	Hs	biological process
forebrain development	Hs	biological process
response to drug	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
brain morphogenesis	Hs	biological process
regulation of oligodendrocyte progenitor proliferation	Hs	biological process
renal system development	Hs	biological process
neuron projection extension	Hs	biological process

GO (Blast)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	132	1.74e-35
RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding	Hs	molecular function	85.9	1.92e-18
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	85.9	1.92e-18
DNA binding	Hs	molecular function	132	1.74e-35
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	85.9	1.92e-18
protein binding	Hs	molecular function	132	1.74e-35
nucleus	Hs	cellular component	132	1.74e-35
nucleolus	Hs	cellular component	132	1.99e-35
cytoplasm	Hs	cellular component	132	1.99e-35
chromatin DNA binding	Hs	molecular function	85.9	1.92e-18
sequence-specific DNA binding	Hs	molecular function	132	1.74e-35

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
DNA binding	SMART	molecular function	1.7E-25
regulation of transcription, DNA-templated	ProSitePatterns	biological process
sequence-specific DNA binding	ProSitePatterns	molecular function

Gene Card

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Transcript Models and Sequences