Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000005779
NCBI Reference Sequence	XM_002128002.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg040j08

Plate: R1CiGC22a07

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Nucleotide-bd_a/b_plait_sf	Gene3D	Nucleotide-binding alpha-beta plait domain superfamily
RRM_dom	SMART	RNA recognition motif domain
RBD_domain_sf	SUPERFAMILY	RNA-binding domain superfamily
NELFE_RRM	CDD	Negative elongation factor E, RNA recognition motif
RRM_dom	ProSiteProfiles	RNA recognition motif domain
NELFE	PANTHER	Negative elongation factor E
RRM_dom	Pfam	RNA recognition motif domain

GOSlim

22 results

GO Term	Annotation Origin	Type
nucleic acid binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
plasma membrane	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
nuclear body	Orthology	cellular component
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
chromatin binding	Orthology	molecular function
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
nucleoplasm part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
mRNA processing	Orthology	biological process
negative regulation of gene expression	Orthology	biological process
organelle organization	Orthology	biological process
cellular protein modification process	Orthology	biological process
intracellular signal transduction	Orthology	biological process
positive regulation of signal transduction	Orthology	biological process
protein phosphorylation	Orthology	biological process

GO (Orthology)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
plasma membrane	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
transcription elongation from RNA polymerase II promoter	Hs	biological process
nuclear body	Hs	cellular component
NELF complex	Hs	cellular component
negative regulation of mRNA polyadenylation	Hs	biological process
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
chromatin binding	Hs	molecular function
negative regulation of transcription elongation from RNA polymerase II promoter	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
positive regulation of histone H3-K4 methylation	Hs	biological process
positive regulation of ERK1 and ERK2 cascade	Hs	biological process

GO (Blast)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleic acid binding	Hs	molecular function	111	4.04e-28
RNA binding	Hs	molecular function	111	4.04e-28
protein binding	Hs	molecular function	111	4.04e-28
nucleus	Hs	cellular component	111	4.04e-28
nucleoplasm	Hs	cellular component	111	4.04e-28
plasma membrane	Hs	cellular component	111	4.04e-28
nuclear body	Hs	cellular component	111	4.04e-28
NELF complex	Hs	cellular component	111	4.04e-28

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
nucleic acid binding	SUPERFAMILY	molecular function	2.17E-18
regulation of transcription, DNA-templated	PANTHER	biological process	3.2E-85
NELF complex	PANTHER	cellular component	3.2E-85

Gene Card

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