Aniseed - Gene card

Gene Card

Best human hits

FAH

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00011309

Gene Model ID

KH2012:KH.L147.3

Location

KhL147:120739..126360

Transcript Models and Sequences

KH2012:KH.L147.3.v1.A.nonSL10-1
KH2012:KH.L147.3.v1.A.nonSL11-1
KH2012:KH.L147.3.v1.A.nonSL12-1
KH2012:KH.L147.3.v1.A.nonSL13-1
KH2012:KH.L147.3.v1.A.nonSL14-1
KH2012:KH.L147.3.v1.A.nonSL3-1
KH2012:KH.L147.3.v1.A.nonSL4-1
KH2012:KH.L147.3.v1.A.nonSL5-1
KH2012:KH.L147.3.v1.A.nonSL6-1
KH2012:KH.L147.3.v1.A.nonSL7-1
KH2012:KH.L147.3.v1.A.nonSL8-1
KH2012:KH.L147.3.v1.A.nonSL9-1
KH2012:KH.L147.3.v1.A.SL2-1
KH2012:KH.L147.3.v2.A.ND1-1
KH2012:KH.L147.3.v3.A.ND1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000004146
NCBI Reference Sequence	XM_004227016.3

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl031a16

Plate: R1CiGC12c24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Fumarylacetoacetase	TIGRFAM	Fumarylacetoacetase
Fumarylacetoacetase_N_sf	Gene3D	Fumarylacetoacetase, N-terminal domain superfamily
Fumarylacetoacetase-like_C	Pfam	Fumarylacetoacetase-like, C-terminal
Fumarylacetoacetase	PANTHER	Fumarylacetoacetase
Fumarylacetoacetase_C_sf	SUPERFAMILY	Fumarylacetoacetase-like, C-terminal domain superfamily
Fumarylacetoacetase_N_sf	SUPERFAMILY	Fumarylacetoacetase, N-terminal domain superfamily
Fumarylacetoacetase_C_sf	Gene3D	Fumarylacetoacetase-like, C-terminal domain superfamily
Fumarylacetoacetase_N	Pfam	Fumarylacetoacetase, N-terminal

GOSlim

9 results

GO Term	Annotation Origin	Type
catalytic activity	Orthology	molecular function
protein binding	Orthology	molecular function
cytosol	Orthology	cellular component
metabolic process	Orthology	biological process
hydrolase activity	Orthology	molecular function
metal ion binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component
aromatic compound catabolic process	Orthology	biological process
cellular aromatic compound metabolic process	Orthology	biological process

GO (Orthology)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
catalytic activity	Hs	molecular function
fumarylacetoacetase activity	Hs	molecular function
protein binding	Hs	molecular function
cytosol	Hs	cellular component
arginine catabolic process	Hs	biological process
L-phenylalanine catabolic process	Hs	biological process
tyrosine catabolic process	Hs	biological process
metabolic process	Hs	biological process
aromatic amino acid family metabolic process	Hs	biological process
hydrolase activity	Hs	molecular function
metal ion binding	Hs	molecular function
extracellular exosome	Hs	cellular component

GO (Blast)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
catalytic activity	Hs	molecular function	607
fumarylacetoacetase activity	Hs	molecular function	607
protein binding	Hs	molecular function	607
cytosol	Hs	cellular component	607
hydrolase activity	Hs	molecular function	607
metal ion binding	Hs	molecular function	607
extracellular exosome	Hs	cellular component	607

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
catalytic activity	Gene3D	molecular function	2.0E-131
fumarylacetoacetase activity	PANTHER	molecular function	1.7E-215
metabolic process	Gene3D	biological process	2.0E-131
aromatic amino acid family metabolic process	PANTHER	biological process	1.7E-215