Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000005113
NCBI Reference Sequence	XM_002129242.3

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

1 result

cieg019l05

Plate: R1CiGC18h03

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
tRNA-bd_dom	ProSiteProfiles	tRNA-binding domain
tRNA-bd_dom	Pfam	tRNA-binding domain
Rossmann-like_a/b/a_fold	Gene3D	Rossmann-like alpha/beta/alpha sandwich fold
Tyr-tRNA-ligase	CDD	Tyrosine-tRNA ligase
Tyr-tRNA-ligase	PRINTS	Tyrosine-tRNA ligase
Tyr-tRNA-ligase	TIGRFAM	Tyrosine-tRNA ligase
aa-tRNA-synth_Ic	Pfam	Aminoacyl-tRNA synthetase, class Ic
NA-bd_OB-fold	SUPERFAMILY	Nucleic acid-binding, OB-fold

GOSlim

31 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
RNA binding	Orthology	molecular function
signal transducer activity	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
extracellular region	Blast	cellular component
extracellular space	Orthology	cellular component
nucleus	Blast	cellular component
cytoplasm	Orthology	cellular component
endoplasmic reticulum	Blast	cellular component
Golgi apparatus	Blast	cellular component
cytosol	Orthology	cellular component
apoptotic process	Orthology	biological process
signal transduction	Orthology	biological process
cell surface	Blast	cellular component
membrane	Blast	cellular component
nuclear body	Orthology	cellular component
ligase activity	Orthology	molecular function
cytoplasmic vesicle	Blast	cellular component
protein homodimerization activity	Blast	molecular function
receptor binding	Orthology	molecular function
RNA metabolic process	Orthology	biological process
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
regulation of gene expression	Blast	biological process
molecular function regulator	Blast	molecular function
regulation of signal transduction	Blast	biological process
signaling receptor activity	Blast	molecular function
endomembrane system	Blast	cellular component
enzyme binding	Blast	molecular function

GO (Orthology)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
tRNA binding	Hs	molecular function
nucleotide binding	Hs	molecular function
RNA binding	Hs	molecular function
aminoacyl-tRNA ligase activity	Hs	molecular function
tyrosine-tRNA ligase activity	Hs	molecular function
signal transducer activity	Hs	molecular function
interleukin-8 receptor binding	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
extracellular space	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
translation	Hs	biological process
tRNA aminoacylation for protein translation	Hs	biological process
tyrosyl-tRNA aminoacylation	Hs	biological process
apoptotic process	Hs	biological process
signal transduction	Hs	biological process
nuclear body	Hs	cellular component
ligase activity	Hs	molecular function
aminoacyl-tRNA synthetase multienzyme complex	Hs	cellular component
methionyl glutamyl tRNA synthetase complex	Hs	cellular component

GO (Blast)

29 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
tRNA binding	Hs	molecular function	736	0.0
nucleotide binding	Hs	molecular function	736	0.0
RNA binding	Hs	molecular function	736	0.0
translation elongation factor activity	Hs	molecular function	42.7	2.60e-04
aminoacyl-tRNA ligase activity	Hs	molecular function	736	0.0
tyrosine-tRNA ligase activity	Hs	molecular function	736	0.0
signal transducer activity	Hs	molecular function	736	0.0
cytokine activity	Hs	molecular function	161	1.25e-44
interleukin-8 receptor binding	Hs	molecular function	736	0.0
protein binding	Hs	molecular function	736	0.0
ATP binding	Hs	molecular function	736	0.0
extracellular region	Hs	cellular component	161	1.25e-44
extracellular space	Hs	cellular component	736	0.0
nucleus	Hs	cellular component	161	1.25e-44
cytoplasm	Hs	cellular component	736	0.0
endoplasmic reticulum	Hs	cellular component	161	1.25e-44
Golgi apparatus	Hs	cellular component	161	1.25e-44
cytosol	Hs	cellular component	736	0.0
eukaryotic translation elongation factor 1 complex	Hs	cellular component	42.7	2.60e-04
cell surface	Hs	cellular component	161	1.25e-44
membrane	Hs	cellular component	161	1.25e-44
nuclear body	Hs	cellular component	736	0.0
ligase activity	Hs	molecular function	736	0.0
aminoacyl-tRNA synthetase multienzyme complex	Hs	cellular component	736	0.0
methionyl glutamyl tRNA synthetase complex	Hs	cellular component	736	0.0
transport vesicle	Hs	cellular component	161	1.25e-44
cytoplasmic vesicle	Hs	cellular component	161	1.25e-44
protein homodimerization activity	Hs	molecular function	161	1.25e-44
GTPase binding	Hs	molecular function	161	1.25e-44

GO (InterProScan)

8 results

GO Term	Analysis	Type	e-value
tRNA binding	Pfam	molecular function	2.5E-27
nucleotide binding	CDD	molecular function	1.49721E-92
aminoacyl-tRNA ligase activity	Pfam	molecular function	7.6E-68
tyrosine-tRNA ligase activity	CDD	molecular function	1.49721E-92
ATP binding	CDD	molecular function	1.49721E-92
cytoplasm	CDD	cellular component	1.49721E-92
tRNA aminoacylation for protein translation	Pfam	biological process	7.6E-68
tyrosyl-tRNA aminoacylation	CDD	biological process	1.49721E-92

Gene Card

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Transcript Models and Sequences