Aniseed - Gene card

Gene Card

Best human hits

CNOT10

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00011419

Gene Model ID

KH2012:KH.L152.41

Location

KhL152:182673..190466

Transcript Models and Sequences

KH2012:KH.L152.41.v1.A.SL1-1
KH2012:KH.L152.41.v1.A.SL2-1

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000000385
NCBI Reference Sequence	XM_002131609.3
NCBI Reference Sequence	XM_018815410.1
NCBI Reference Sequence	XM_018815411.1

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

1 result

cicl057g13

Plate: R1CiGC14j04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
TPR-like_helical_dom_sf	SUPERFAMILY	Tetratricopeptide-like helical domain superfamily
TPR-like_helical_dom_sf	Gene3D	Tetratricopeptide-like helical domain superfamily
TPR_repeat	SMART	Tetratricopeptide repeat

GOSlim

13 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
membrane	Orthology	cellular component
nuclear-transcribed mRNA catabolic process	Orthology	biological process
regulation of gene expression	Orthology	biological process
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
negative regulation of gene expression	Orthology	biological process
cellular process	Orthology	biological process

GO (Orthology)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nuclear-transcribed mRNA poly(A) tail shortening	Hs	biological process
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of translation	Hs	biological process
membrane	Hs	cellular component
CCR4-NOT complex	Hs	cellular component
gene silencing by RNA	Hs	biological process

GO (Blast)

6 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	383	2.27e-121
nucleus	Hs	cellular component	383	2.27e-121
cytoplasm	Hs	cellular component	383	2.27e-121
cytosol	Hs	cellular component	383	2.27e-121
membrane	Hs	cellular component	383	2.27e-121
CCR4-NOT complex	Hs	cellular component	383	2.27e-121

GO (InterProScan)