Aniseed - Gene card

Gene Card

Best human hits

AL360181.3; GNL3L; MTG1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00011466

Gene Model ID

KH2012:KH.L153.18

Location

KhL153:657077..659018

Transcript Models and Sequences

KH2012:KH.L153.18.v1.A.ND1-1
KH2012:KH.L153.18.v1.A.SL2-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000015202
NCBI Reference Sequence	XM_018815467.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl050p06

Plate: R1CiGC13n18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
GTP_binding_domain	Pfam	GTP binding domain
GTP-bd_ortho_bundle_sf	Gene3D	GTP-binding protein, orthogonal bundle domain superfamily
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase

GOSlim

16 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
RNA binding	Blast	molecular function
GTPase activity	Orthology	molecular function
protein binding	Blast	molecular function
GTP binding	Orthology	molecular function
nucleus	Blast	cellular component
nucleolus	Blast	cellular component
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component
cytosol	Blast	cellular component
membrane	Orthology	cellular component
ribosome	Orthology	cellular component
regulation of gene expression	Orthology	biological process
nuclear part	Blast	cellular component
macromolecular complex	Blast	cellular component

GO (Orthology)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
GTPase activity	Hs	molecular function
GTP binding	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial matrix	Hs	cellular component
mitochondrial ribosome	Hs	cellular component
regulation of translation	Hs	biological process
membrane	Hs	cellular component
ribosome biogenesis	Hs	biological process
regulation of mitochondrial translation	Hs	biological process

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	278	8.29e-92
RNA binding	Hs	molecular function	60.5	6.51e-10
GTPase activity	Hs	molecular function	278	8.29e-92
protein binding	Hs	molecular function	60.5	6.51e-10
GTP binding	Hs	molecular function	278	8.29e-92
nucleus	Hs	cellular component	60.5	6.51e-10
telomerase holoenzyme complex	Hs	cellular component	60.5	6.51e-10
nucleolus	Hs	cellular component	60.5	6.51e-10
mitochondrion	Hs	cellular component	278	8.29e-92
mitochondrial inner membrane	Hs	cellular component	278	8.29e-92
mitochondrial matrix	Hs	cellular component	278	8.29e-92
mitochondrial ribosome	Hs	cellular component	278	8.29e-92
cytosol	Hs	cellular component	60.5	6.51e-10
membrane	Hs	cellular component	278	8.29e-92

GO (InterProScan)