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Gene Card

Best human hits

CCT4; CCT8; CCT8L2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00011494

Gene Model ID

KH2012:KH.L153.45

Location

KhL153:314220..322150

Transcript Models and Sequences

  KH2012:KH.L153.45.v1.A.ND2-1
KH2012:KH.L153.45.v1.A.SL1-1
KH2012:KH.L153.45.v1.A.SL3-1
KH2012:KH.L153.45.v2.A.SL1-1
KH2012:KH.L153.45.v2.A.SL3-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000007045
ENSEMBL ENSCING00000018700
NCBI Reference Sequence XM_009863012.2
Collections

Gateway full ORF

2 results

cien128661

Plate: VES90_H11

cien168614

Plate: VES96_I10

Gene collection 1 (N. Satoh)

1 result

cieg023b02

Plate: R1CiGC19i19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
Chap_CCT_theta TIGRFAM T-complex protein 1, theta subunit
GroEL-like_apical_dom_sf Gene3D GroEL-like apical domain superfamily
Cpn60/TCP-1 Pfam Chaperonin Cpn60/TCP-1 family
Chap_CCT_theta CDD T-complex protein 1, theta subunit
GROEL-like_equatorial_sf SUPERFAMILY GroEL-like equatorial domain superfamily
Chaperone_TCP-1 PRINTS Chaperone tailless complex polypeptide 1 (TCP-1)
TCP-1-like_intermed_sf Gene3D TCP-1-like chaperonin intermediate domain superfamily
GROEL-like_equatorial_sf Gene3D GroEL-like equatorial domain superfamily
GroEL-like_apical_dom_sf SUPERFAMILY GroEL-like apical domain superfamily
TCP-1-like_intermed_sf SUPERFAMILY TCP-1-like chaperonin intermediate domain superfamily
Chaperonin_TCP-1_CS ProSitePatterns Chaperonin TCP-1, conserved site
Cpn60/TCP-1 PANTHER Chaperonin Cpn60/TCP-1 family

GOSlim

33 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
RNA binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
extracellular region Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
centrosome Blast cellular component
microtubule organizing center Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
microtubule Blast cellular component
protein folding Blast biological process
melanosome Blast cellular component
cell projection Blast cellular component
cell body Blast cellular component
unfolded protein binding Blast molecular function
extracellular exosome Blast cellular component
macromolecular complex Blast cellular component
ion transport Blast biological process
transmembrane transport Blast biological process
organelle Blast cellular component
plasma membrane region Blast cellular component
metal ion transport Blast biological process
monovalent inorganic cation transport Blast biological process
intracellular organelle part Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
intracellular organelle lumen Blast cellular component
lysosome Blast cellular component
vacuolar part Blast cellular component
nucleoside-triphosphatase activity Blast molecular function
cell adhesion molecule binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 745 0.0
zona pellucida receptor complex Hs cellular component 745 0.0
RNA binding Hs molecular function 233 9.27e-70
anion channel activity Hs molecular function 237 4.43e-71
protein binding Hs molecular function 745 0.0
ATP binding Hs molecular function 745 0.0
extracellular region Hs cellular component 745 0.0
nucleoplasm Hs cellular component 745 0.0
cytoplasm Hs cellular component 745 0.0
centrosome Hs cellular component 745 0.0
microtubule organizing center Hs cellular component 745 0.0
cytosol Hs cellular component 745 0.0
chaperonin-containing T-complex Hs cellular component 745 0.0
cytoskeleton Hs cellular component 745 0.0
microtubule Hs cellular component 745 0.0
cilium Hs cellular component 745 0.0
calcium-activated potassium channel activity Hs molecular function 237 4.43e-71
secretory granule lumen Hs cellular component 745 0.0
azurophil granule lumen Hs cellular component 745 0.0
melanosome Hs cellular component 233 9.27e-70
ATPase activity, coupled Hs molecular function 745 0.0
cell projection Hs cellular component 745 0.0
protein binding involved in protein folding Hs molecular function 745 0.0
cell body Hs cellular component 745 0.0
intermediate filament cytoskeleton Hs cellular component 745 0.0
cadherin binding Hs molecular function 745 0.0
unfolded protein binding Hs molecular function 745 0.0
extracellular exosome Hs cellular component 745 0.0
ficolin-1-rich granule lumen Hs cellular component 745 0.0

GO (InterProScan)

3 results

GO Term Analysis Type e-value
ATP binding CDD molecular function 0.0
protein folding CDD biological process 0.0
unfolded protein binding CDD molecular function 0.0

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