Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000001265

Collections

Gene collection 1 (N. Satoh)

1 result

cilv041m16

Plate: R1CiGC28m24

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

1 results

Ci-opsin1 -4962/38 REG00000487 [ regulatory_region (extended_promoter) ]

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
GPCR_Rhodpsn_7TM	ProSiteProfiles	GPCR, rhodopsin-like, 7TM
GPCR_Rhodpsn	Pfam	G protein-coupled receptor, rhodopsin-like
GPCR_Rhodpsn	ProSitePatterns	G protein-coupled receptor, rhodopsin-like
GPCR_Rhodpsn	PRINTS	G protein-coupled receptor, rhodopsin-like
Retinal_BS	ProSitePatterns	Visual pigments (opsins) retinal binding site

GOSlim

40 results

GO Term	Annotation Origin	Type
signal transducer activity	Orthology	molecular function
G-protein coupled receptor activity	Orthology	molecular function
plasma membrane	Orthology	cellular component
integral component of plasma membrane	Orthology	cellular component
signal transduction	Orthology	biological process
G-protein coupled receptor signaling pathway	Orthology	biological process
visual perception	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
response to stimulus	Orthology	biological process
Golgi membrane	Orthology	cellular component
protein binding	Orthology	molecular function
Golgi apparatus	Orthology	cellular component
protein phosphorylation	Orthology	biological process
identical protein binding	Orthology	molecular function
cell projection	Orthology	cellular component
metal ion binding	Orthology	molecular function
sensory perception of light stimulus	Orthology	biological process
cellular metabolic process	Orthology	biological process
organic substance metabolic process	Orthology	biological process
organelle part	Orthology	cellular component
cell projection part	Orthology	cellular component
neuron projection	Orthology	cellular component
macromolecular complex	Orthology	cellular component
signaling receptor activity	Orthology	molecular function
cellular protein modification process	Orthology	biological process
membrane organization	Orthology	biological process
cell division	Orthology	biological process
cell projection membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
neuron part	Orthology	cellular component
small molecule binding	Orthology	molecular function
cell junction	Orthology	cellular component
cellular process	Orthology	biological process
regulation of signal transduction	Orthology	biological process
intracellular organelle part	Orthology	cellular component
whole membrane	Orthology	cellular component
cytoplasmic vesicle	Orthology	cellular component
animal organ development	Orthology	biological process
plasma membrane region	Orthology	cellular component

GO (Orthology)

44 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
retinoid metabolic process	Hs	biological process
photoreceptor outer segment	Hs	cellular component
signal transducer activity	Hs	molecular function
G-protein coupled receptor activity	Hs	molecular function
plasma membrane	Hs	cellular component
integral component of plasma membrane	Hs	cellular component
signal transduction	Hs	biological process
G-protein coupled receptor signaling pathway	Hs	biological process
visual perception	Hs	biological process
phototransduction	Hs	biological process
G-protein coupled photoreceptor activity	Hs	molecular function
detection of visible light	Hs	biological process
photoreceptor activity	Hs	molecular function
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
protein-chromophore linkage	Hs	biological process
positive regulation of cytokinesis	Hs	biological process
response to stimulus	Hs	biological process
photoreceptor disc membrane	Hs	cellular component
Golgi membrane	Hs	cellular component
photoreceptor inner segment	Hs	cellular component
receptor activity	Hs	molecular function
11-cis retinal binding	Hs	molecular function
protein binding	Hs	molecular function
Golgi apparatus	Hs	cellular component
cell-cell junction	Hs	cellular component
protein phosphorylation	Hs	biological process
phototransduction, visible light	Hs	biological process
response to light stimulus	Hs	biological process
detection of light stimulus	Hs	biological process
absorption of visible light	Hs	biological process
rhodopsin mediated signaling pathway	Hs	biological process
regulation of rhodopsin mediated signaling pathway	Hs	biological process
Golgi-associated vesicle membrane	Hs	cellular component
photoreceptor outer segment membrane	Hs	cellular component
identical protein binding	Hs	molecular function
cell projection	Hs	cellular component
photoreceptor cell maintenance	Hs	biological process
metal ion binding	Hs	molecular function
sensory perception of light stimulus	Hs	biological process
retina development in camera-type eye	Hs	biological process
ciliary membrane	Hs	cellular component
photoreceptor inner segment membrane	Hs	cellular component
cellular response to light stimulus	Hs	biological process

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
photoreceptor outer segment	Hs	cellular component	259	6.04e-84
signal transducer activity	Hs	molecular function	259	6.04e-84
G-protein coupled receptor activity	Hs	molecular function	259	6.04e-84
plasma membrane	Hs	cellular component	255	3.04e-82
integral component of plasma membrane	Hs	cellular component	259	6.04e-84
G-protein coupled photoreceptor activity	Hs	molecular function	259	6.04e-84
photoreceptor activity	Hs	molecular function	259	6.04e-84
membrane	Hs	cellular component	259	6.04e-84
integral component of membrane	Hs	cellular component	259	6.04e-84
photoreceptor disc membrane	Hs	cellular component	259	6.04e-84

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
G-protein coupled receptor activity	Pfam	molecular function	2.5E-44
G-protein coupled receptor signaling pathway	Pfam	biological process	2.5E-44
integral component of membrane	Pfam	cellular component	2.5E-44

Gene Card

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