Gene Card
Best human hits
SSR4
Unique Gene ID
Cirobu.g00011911
Gene Model ID
KH2012:KH.L18.107
Location
KhL18:52281..54059
Transcript Models and Sequences
KH2012:KH.L18.107.v1.A.ND1-1
KH2012:KH.L18.107.v1.A.nonSL4-1
KH2012:KH.L18.107.v1.A.SL2-1
KH2012:KH.L18.107.v1.A.SL3-1
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000016350 |
| NCBI Reference Sequence | XM_002130937.4 |
Gateway full ORF
2 results
cien98901
Plate: VES85_P18
cima898541
Plate: VES72_B10
Gene collection 1 (N. Satoh)
1 result
cieg004m12
Plate: R1CiGC16i15
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
2 results
| IPR Term | Analysis | Definition |
|---|---|---|
| TRAP-delta | Pfam | Translocon-associated |
| TRAP-delta | PANTHER | Translocon-associated |
GOSlim
7 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| endoplasmic reticulum | Orthology | cellular component |
| endoplasmic reticulum membrane | Orthology | cellular component |
| membrane | Orthology | cellular component |
| integral component of membrane | Orthology | cellular component |
| extracellular exosome | Orthology | cellular component |
| bounding membrane of organelle | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
GO (Orthology)
6 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| endoplasmic reticulum | Hs | cellular component |
| Sec61 translocon complex | Hs | cellular component |
| endoplasmic reticulum membrane | Hs | cellular component |
| membrane | Hs | cellular component |
| integral component of membrane | Hs | cellular component |
| extracellular exosome | Hs | cellular component |
GO (Blast)
6 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| endoplasmic reticulum | Hs | cellular component | 142 | 1.53e-43 |
| Sec61 translocon complex | Hs | cellular component | 142 | 1.53e-43 |
| endoplasmic reticulum membrane | Hs | cellular component | 142 | 1.53e-43 |
| membrane | Hs | cellular component | 142 | 1.53e-43 |
| integral component of membrane | Hs | cellular component | 142 | 1.53e-43 |
| extracellular exosome | Hs | cellular component | 142 | 1.53e-43 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| endoplasmic reticulum | PANTHER | cellular component | 2.2E-64 |
| integral component of membrane | PANTHER | cellular component | 2.2E-64 |
