Aniseed - Gene card

Gene Card

Best human hits

GPS2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012033

Gene Model ID

KH2012:KH.L18.90

Location

KhL18:166456..170590

Transcript Models and Sequences

KH2012:KH.L18.90.v1.A.nonSL3-1
KH2012:KH.L18.90.v1.A.nonSL4-1
KH2012:KH.L18.90.v1.A.nonSL5-1
KH2012:KH.L18.90.v1.A.SL1-1
KH2012:KH.L18.90.v2.A.SL2-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000003032
NCBI Reference Sequence	XM_002131553.3
NCBI Reference Sequence	XM_009863130.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg030b10

Plate: R1CiGC20m18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
GPS2	Pfam	G protein pathway suppressor 2
GPS2	PANTHER	G protein pathway suppressor 2

GOSlim

14 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription corepressor activity	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
regulation of catalytic activity	Orthology	biological process
intracellular signal transduction	Orthology	biological process
protein serine/threonine kinase activity	Orthology	molecular function
negative regulation of signal transduction	Orthology	biological process
regulation of GTPase activity	Orthology	biological process
GTPase regulator activity	Orthology	molecular function
cellular response to stress	Orthology	biological process
protein phosphorylation	Orthology	biological process
macromolecular complex	Orthology	cellular component

GO (Orthology)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
inactivation of MAPK activity	Hs	biological process
transcription corepressor activity	Hs	molecular function
GTPase inhibitor activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
JNK cascade	Hs	biological process
transcriptional repressor complex	Hs	cellular component
cyclin binding	Hs	molecular function
negative regulation of GTPase activity	Hs	biological process
negative regulation of JNK cascade	Hs	biological process

GO (Blast)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
transcription corepressor activity	Hs	molecular function	88.6	5.30e-20
GTPase inhibitor activity	Hs	molecular function	88.6	5.30e-20
protein binding	Hs	molecular function	88.6	5.30e-20
nucleus	Hs	cellular component	88.6	5.30e-20
nucleoplasm	Hs	cellular component	88.6	5.30e-20
transcriptional repressor complex	Hs	cellular component	88.6	5.30e-20
cyclin binding	Hs	molecular function	88.6	5.30e-20

GO (InterProScan)