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Gene Card

Best human hits

IST1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012150

Gene Model ID

KH2012:KH.L22.35

Location

KhL22:128571..130225

Transcript Models and Sequences

  KH2012:KH.L22.35.v1.C.ND1-1
KH2012:KH.L22.35.v1.C.SL2-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000002913
NCBI Reference Sequence XM_009863208.2
Collections

Gateway full ORF

2 results

cien128202

Plate: VES90_A08

cien212351

Plate: VES103_A06

Gene collection 1 (N. Satoh)

1 result

cits041d22

Plate: R1CiGC35a08

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Ist1 PANTHER Vacuolar protein sorting-associated protein Ist1
Ist1 Pfam Vacuolar protein sorting-associated protein Ist1

GOSlim

29 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
extracellular region Orthology cellular component
nucleus Orthology cellular component
nuclear envelope Orthology cellular component
cytoplasm Orthology cellular component
centrosome Orthology cellular component
microtubule organizing center Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
cell cycle Orthology biological process
protein localization Orthology biological process
protein transport Orthology biological process
midbody Orthology cellular component
cytoplasmic vesicle Orthology cellular component
intracellular membrane-bounded organelle Orthology cellular component
macromolecular complex binding Orthology molecular function
establishment of protein localization Orthology biological process
cell division Orthology biological process
extracellular exosome Orthology cellular component
intracellular organelle part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
cytoplasmic part Orthology cellular component
multicellular organism development Orthology biological process
lysosome Orthology cellular component
vacuolar part Orthology cellular component
endomembrane system Orthology cellular component
intracellular organelle lumen Orthology cellular component
cell adhesion molecule binding Orthology molecular function
proteolysis Orthology biological process

GO (Orthology)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
chromatin Hs cellular component
protein binding Hs molecular function
extracellular region Hs cellular component
nucleus Hs cellular component
nuclear envelope Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum-Golgi intermediate compartment Hs cellular component
centrosome Hs cellular component
microtubule organizing center Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
cell cycle Hs biological process
protein localization Hs biological process
abscission Hs biological process
protein transport Hs biological process
protein domain specific binding Hs molecular function
midbody Hs cellular component
cytoplasmic vesicle Hs cellular component
azurophil granule lumen Hs cellular component
multivesicular body assembly Hs biological process
intracellular membrane-bounded organelle Hs cellular component
macromolecular complex binding Hs molecular function
establishment of protein localization Hs biological process
cadherin binding Hs molecular function
positive regulation of proteolysis Hs biological process
cell division Hs biological process
extracellular exosome Hs cellular component
MIT domain binding Hs molecular function
Flemming body Hs cellular component

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
chromatin Hs cellular component 241 7.51e-77
protein binding Hs molecular function 241 7.51e-77
extracellular region Hs cellular component 241 7.51e-77
nucleus Hs cellular component 241 7.51e-77
nuclear envelope Hs cellular component 241 7.51e-77
cytoplasm Hs cellular component 241 7.51e-77
endoplasmic reticulum-Golgi intermediate compartment Hs cellular component 241 7.51e-77
centrosome Hs cellular component 241 7.51e-77
microtubule organizing center Hs cellular component 241 7.51e-77
cytosol Hs cellular component 241 7.51e-77
cytoskeleton Hs cellular component 241 7.51e-77
protein domain specific binding Hs molecular function 241 7.51e-77
midbody Hs cellular component 241 7.51e-77
cytoplasmic vesicle Hs cellular component 241 7.51e-77
azurophil granule lumen Hs cellular component 241 7.51e-77
intracellular membrane-bounded organelle Hs cellular component 241 7.51e-77
macromolecular complex binding Hs molecular function 241 7.51e-77
cadherin binding Hs molecular function 241 7.51e-77
extracellular exosome Hs cellular component 241 7.51e-77
MIT domain binding Hs molecular function 241 7.51e-77
Flemming body Hs cellular component 241 7.51e-77

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein transport PANTHER biological process 4.0E-85

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