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Gene Card

Best human hits

MYO1B; MYO1E; MYO1F

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012196

Gene Model ID

KH2012:KH.L23.1

Location

KhL23:39193..58839

Transcript Models and Sequences

  KH2012:KH.L23.1.v1.A.SL2-1
KH2012:KH.L23.1.v1.A.SL3-1
KH2012:KH.L23.1.v2.A.SL1-1
KH2012:KH.L23.1.v2.A.SL4-1
KH2012:KH.L23.1.v2.A.SL5-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000003718
ENSEMBL ENSCING00000018260
NCBI Reference Sequence XM_002124749.4
Collections

Gateway full ORF

2 results

cien78422

Plate: VES82_M15

cien153877

Plate: VES94_C03

Gene collection 1 (N. Satoh)

1 result

cicl006a01

Plate: R1CiGC08n12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

16 results

IPR Term Analysis Definition
Myosin_head_motor_dom SMART Myosin head, motor domain
SH3_domain PRINTS SH3 domain
Myosin_head_motor_dom Pfam Myosin head, motor domain
Ie/If_SH3 CDD Unconventional myosin-Ie/If, SH3 domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Kinesin_motor_dom_sf Gene3D Kinesin motor domain superfamily
IQ_motif_EF-hand-BS ProSiteProfiles IQ motif, EF-hand binding site
MYSc_Myo1 CDD Class I myosin, motor domain
SH3_domain SMART SH3 domain
SH3-like_dom_sf SUPERFAMILY SH3-like domain superfamily
Myosin_head_motor_dom ProSiteProfiles Myosin head, motor domain
Myosin_TH1 Pfam Class I myosin tail homology domain
SH3_domain Pfam SH3 domain
Myosin_TH1 ProSiteProfiles Class I myosin tail homology domain
Myosin_head_motor_dom PRINTS Myosin head, motor domain
SH3_domain ProSiteProfiles SH3 domain

GOSlim

45 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
motor activity Orthology molecular function
microtubule motor activity Orthology molecular function
actin binding Orthology molecular function
protein binding Orthology molecular function
calmodulin binding Orthology molecular function
ATP binding Orthology molecular function
cytoplasm Orthology cellular component
early endosome Blast cellular component
cytoskeleton Orthology cellular component
plasma membrane Blast cellular component
brush border Orthology cellular component
adherens junction Orthology cellular component
nitrogen compound metabolic process Orthology biological process
microtubule-based movement Orthology biological process
microtubule binding Orthology molecular function
cell junction Orthology cellular component
cytoplasmic vesicle Orthology cellular component
apical part of cell Blast cellular component
perinuclear region of cytoplasm Blast cellular component
actin filament binding Orthology molecular function
extracellular exosome Orthology cellular component
cell periphery Blast cellular component
blood vessel morphogenesis Orthology biological process
cell differentiation Orthology biological process
animal organ development Orthology biological process
membrane organization Orthology biological process
organelle organization Orthology biological process
binding Orthology molecular function
cytoskeletal part Orthology cellular component
macromolecular complex Orthology cellular component
immune system process Orthology biological process
extracellular matrix organization Orthology biological process
anion binding Orthology molecular function
nucleoside-triphosphatase activity Orthology molecular function
cell surface receptor signaling pathway Orthology biological process
cell development Orthology biological process
intracellular organelle part Blast cellular component
whole membrane Blast cellular component
endosome Blast cellular component
bounding membrane of organelle Blast cellular component
plasma membrane region Blast cellular component
cell projection Blast cellular component
Golgi membrane Blast cellular component
cell adhesion molecule binding Blast molecular function

GO (Orthology)

37 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
microfilament motor activity Hs molecular function
nucleotide binding Hs molecular function
vasculogenesis Hs biological process
kidney development Hs biological process
glomerular filtration Hs biological process
motor activity Hs molecular function
microtubule motor activity Hs molecular function
actin binding Hs molecular function
protein binding Hs molecular function
calmodulin binding Hs molecular function
ATP binding Hs molecular function
cytoplasm Hs cellular component
cytoskeleton Hs cellular component
brush border Hs cellular component
cell-cell junction Hs cellular component
adherens junction Hs cellular component
nitrogen compound metabolic process Hs biological process
endocytosis Hs biological process
microtubule-based movement Hs biological process
microtubule binding Hs molecular function
lipid binding Hs molecular function
actin cytoskeleton Hs cellular component
myosin complex Hs cellular component
unconventional myosin complex Hs cellular component
actin filament-based movement Hs biological process
cell junction Hs cellular component
hemopoiesis Hs biological process
clathrin-coated vesicle Hs cellular component
cytoplasmic vesicle Hs cellular component
glomerular basement membrane development Hs biological process
phosphatidylinositol binding Hs molecular function
ATPase activity, coupled Hs molecular function
clathrin-coated endocytic vesicle Hs cellular component
platelet-derived growth factor receptor signaling pathway Hs biological process
actin filament binding Hs molecular function
extracellular exosome Hs cellular component
glomerular visceral epithelial cell development Hs biological process

GO (Blast)

39 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
microfilament motor activity Hs molecular function 1452 0.0
nucleotide binding Hs molecular function 1452 0.0
motor activity Hs molecular function 1452 0.0
microtubule motor activity Hs molecular function 1452 0.0
actin binding Hs molecular function 1452 0.0
protein binding Hs molecular function 1452 0.0
calmodulin binding Hs molecular function 1452 0.0
ATP binding Hs molecular function 1452 0.0
phosphatidylinositol-4,5-bisphosphate binding Hs molecular function 603 0.0
phosphatidylinositol-3,4,5-trisphosphate binding Hs molecular function 603 0.0
cytoplasm Hs cellular component 1452 0.0
early endosome Hs cellular component 603 0.0
cytoskeleton Hs cellular component 1452 0.0
actin filament Hs cellular component 603 0.0
plasma membrane Hs cellular component 603 0.0
brush border Hs cellular component 1452 0.0
cell-cell junction Hs cellular component 1452 0.0
adherens junction Hs cellular component 1452 0.0
microtubule binding Hs molecular function 1452 0.0
lipid binding Hs molecular function 1452 0.0
endosome membrane Hs cellular component 603 0.0
actin cytoskeleton Hs cellular component 1452 0.0
myosin complex Hs cellular component 1452 0.0
unconventional myosin complex Hs cellular component 1417 0.0
cell junction Hs cellular component 1452 0.0
clathrin-coated vesicle Hs cellular component 1452 0.0
filopodium Hs cellular component 603 0.0
actin-dependent ATPase activity Hs molecular function 603 0.0
cytoplasmic vesicle Hs cellular component 1452 0.0
trans-Golgi network membrane Hs cellular component 603 0.0
phosphatidylinositol binding Hs molecular function 1452 0.0
ATPase activity, coupled Hs molecular function 1452 0.0
apical part of cell Hs cellular component 603 0.0
cadherin binding Hs molecular function 603 0.0
clathrin-coated endocytic vesicle Hs cellular component 1452 0.0
perinuclear region of cytoplasm Hs cellular component 603 0.0
actin filament binding Hs molecular function 1452 0.0
extracellular exosome Hs cellular component 1452 0.0
cell periphery Hs cellular component 603 0.0

GO (InterProScan)

7 results

GO Term Analysis Type e-value
motor activity SMART molecular function 0.0
microtubule motor activity Gene3D molecular function 4.8E-216
protein binding SUPERFAMILY molecular function 4.86E-23
ATP binding SMART molecular function 0.0
microtubule-based movement Gene3D biological process 4.8E-216
microtubule binding Gene3D molecular function 4.8E-216
myosin complex SMART cellular component 0.0

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