Aniseed - Gene card

Gene Card

Best human hits

RPL23

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012217

Gene Model ID

KH2012:KH.L24.2

Location

KhL24:63849..65908

Transcript Models and Sequences

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000018165

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

4 results

cilv076o10

Plate: R1CiGC44f15

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Ribosomal_L14P	Pfam	Ribosomal protein L14P
Ribosomal_L14P	SMART	Ribosomal protein L14P
Ribosomal_L14_sf	Gene3D	Ribosomal protein L14 superfamily
Ribosomal_L14P	PANTHER	Ribosomal protein L14P
Ribosomal_L14P	Hamap	Ribosomal protein L14P
Ribosomal_L14_sf	SUPERFAMILY	Ribosomal protein L14 superfamily

GOSlim

29 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Orthology	biological process
RNA binding	Orthology	molecular function
structural constituent of ribosome	Orthology	molecular function
protein binding	Orthology	molecular function
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
ribosome	Orthology	cellular component
focal adhesion	Orthology	cellular component
translational initiation	Orthology	biological process
SRP-dependent cotranslational protein targeting to membrane	Orthology	biological process
positive regulation of cell proliferation	Orthology	biological process
positive regulation of gene expression	Orthology	biological process
membrane	Orthology	cellular component
ubiquitin protein ligase binding	Orthology	molecular function
macromolecular complex	Orthology	cellular component
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
extracellular exosome	Orthology	cellular component
transcription factor binding	Orthology	molecular function
RNA processing	Orthology	biological process
intracellular protein transport	Orthology	biological process
establishment of protein localization to organelle	Orthology	biological process
intracellular organelle part	Orthology	cellular component
regulation of catalytic activity	Orthology	biological process
ubiquitin-protein transferase activity	Orthology	molecular function
enzyme regulator activity	Orthology	molecular function
proteolysis	Orthology	biological process

GO (Orthology)

33 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Hs	biological process
transcription coactivator binding	Hs	molecular function
RNA binding	Hs	molecular function
structural constituent of ribosome	Hs	molecular function
protein binding	Hs	molecular function
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
ribosome	Hs	cellular component
focal adhesion	Hs	cellular component
rRNA processing	Hs	biological process
translation	Hs	biological process
translational initiation	Hs	biological process
ribosomal protein import into nucleus	Hs	biological process
SRP-dependent cotranslational protein targeting to membrane	Hs	biological process
positive regulation of cell proliferation	Hs	biological process
positive regulation of gene expression	Hs	biological process
membrane	Hs	cellular component
cytosolic large ribosomal subunit	Hs	cellular component
intracellular ribonucleoprotein complex	Hs	cellular component
ubiquitin protein ligase binding	Hs	molecular function
macromolecular complex	Hs	cellular component
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
protein stabilization	Hs	biological process
extracellular exosome	Hs	cellular component
large ribosomal subunit rRNA binding	Hs	molecular function
negative regulation of cell cycle arrest	Hs	biological process
positive regulation of cell cycle arrest	Hs	biological process
negative regulation of ubiquitin protein ligase activity	Hs	biological process
ubiquitin ligase inhibitor activity	Hs	molecular function
negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process	Hs	biological process

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
transcription coactivator binding	Hs	molecular function	202	9.83e-69
RNA binding	Hs	molecular function	202	9.83e-69
structural constituent of ribosome	Hs	molecular function	202	9.83e-69
protein binding	Hs	molecular function	202	9.83e-69
nucleoplasm	Hs	cellular component	202	9.83e-69
nucleolus	Hs	cellular component	202	9.83e-69
cytoplasm	Hs	cellular component	202	9.83e-69
cytosol	Hs	cellular component	202	9.83e-69
ribosome	Hs	cellular component	202	9.83e-69
focal adhesion	Hs	cellular component	202	9.83e-69
membrane	Hs	cellular component	202	9.83e-69
cytosolic large ribosomal subunit	Hs	cellular component	202	9.83e-69
intracellular ribonucleoprotein complex	Hs	cellular component	202	9.83e-69
ubiquitin protein ligase binding	Hs	molecular function	202	9.83e-69
macromolecular complex	Hs	cellular component	202	9.83e-69
extracellular exosome	Hs	cellular component	202	9.83e-69
large ribosomal subunit rRNA binding	Hs	molecular function	202	9.83e-69
ubiquitin ligase inhibitor activity	Hs	molecular function	202	9.83e-69

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
structural constituent of ribosome	PANTHER	molecular function	3.8E-60
ribosome	PANTHER	cellular component	3.8E-60
translation	PANTHER	biological process	3.8E-60