Gene Card
Best human hits
TRIM54; TRIM55; TRIM63
Unique Gene ID
Cirobu.g00012308
Gene Model ID
KH2012:KH.L31.3
Location
KhL31:469..9732
External database links
5 results
Gateway full ORF
1 result
cima897639
Plate: VES72_L06
Gene collection 1 (N. Satoh)
1 result
ciad009o03
Plate: R1CiGC01p14
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
10 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Znf_B-box | SMART | B-box-type zinc finger |
| Znf_B-box | CDD | B-box-type zinc finger |
| Znf_B-box | ProSiteProfiles | B-box-type zinc finger |
| Znf_B-box | Pfam | B-box-type zinc finger |
| COS_domain | ProSiteProfiles | COS domain |
| Znf_RING_CS | ProSitePatterns | Zinc finger, RING-type, conserved site |
| Znf_RING/FYVE/PHD | Gene3D | Zinc finger, RING/FYVE/PHD-type |
| Znf_RING | ProSiteProfiles | Zinc finger, RING-type |
| Znf-RING_LisH | Pfam | RING-type zinc-finger, LisH dimerisation motif |
| Znf_RING | SMART | Zinc finger, RING-type |
GOSlim
20 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| ubiquitin-protein transferase activity | Blast | molecular function |
| signal transducer activity | Blast | molecular function |
| protein binding | Blast | molecular function |
| intracellular | Blast | cellular component |
| nucleus | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| cytoskeleton | Blast | cellular component |
| microtubule | Blast | cellular component |
| microtubule binding | Blast | molecular function |
| zinc ion binding | Blast | molecular function |
| transferase activity | Blast | molecular function |
| identical protein binding | Blast | molecular function |
| metal ion binding | Blast | molecular function |
| cytoskeletal part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| microtubule cytoskeleton | Blast | cellular component |
| organelle part | Blast | cellular component |
| cytoplasmic part | Blast | cellular component |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| cytoskeletal protein binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
18 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| ubiquitin-protein transferase activity | Hs | molecular function | 238 | 6.09e-74 |
| signal transducer activity | Hs | molecular function | 256 | 1.98e-78 |
| protein binding | Hs | molecular function | 256 | 1.98e-78 |
| intracellular | Hs | cellular component | 256 | 1.98e-78 |
| nucleus | Hs | cellular component | 256 | 1.98e-78 |
| cytoplasm | Hs | cellular component | 256 | 1.98e-78 |
| cytoskeleton | Hs | cellular component | 241 | 2.07e-74 |
| microtubule | Hs | cellular component | 256 | 1.98e-78 |
| microtubule associated complex | Hs | cellular component | 241 | 2.07e-74 |
| microtubule binding | Hs | molecular function | 241 | 2.07e-74 |
| zinc ion binding | Hs | molecular function | 256 | 1.98e-78 |
| transferase activity | Hs | molecular function | 238 | 6.09e-74 |
| Z disc | Hs | cellular component | 241 | 2.07e-74 |
| M band | Hs | cellular component | 238 | 6.09e-74 |
| titin binding | Hs | molecular function | 238 | 6.09e-74 |
| identical protein binding | Hs | molecular function | 256 | 1.98e-78 |
| contractile fiber | Hs | cellular component | 238 | 6.09e-74 |
| metal ion binding | Hs | molecular function | 256 | 1.98e-78 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| intracellular | CDD | cellular component | 1.165E-7 |
| zinc ion binding | CDD | molecular function | 1.165E-7 |
