Aniseed - Gene card

Gene Card

Best human hits

ASH2L; RSPRY1; RYR3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012346

Gene Model ID

KH2012:KH.L34.7

Location

KhL34:12644..15361

Transcript Models and Sequences

KH2012:KH.L34.7.v1.A.nonSL4-1
KH2012:KH.L34.7.v1.A.SL1-1
KH2012:KH.L34.7.v1.A.SL2-1
KH2012:KH.L34.7.v1.A.SL3-1
KH2012:KH.L34.7.v1.A.SL5-1
KH2012:KH.L34.7.v2.A.nonSL4-1
KH2012:KH.L34.7.v2.A.SL1-1
KH2012:KH.L34.7.v2.A.SL2-1
KH2012:KH.L34.7.v2.A.SL3-1
KH2012:KH.L34.7.v2.A.SL5-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000000019
NCBI Reference Sequence	NM_001078507.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb041n14

Plate: R1CiGC33e13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
B30.2/SPRY	ProSiteProfiles	B30.2/SPRY domain
SPRY_dom	SMART	SPRY domain
ConA-like_dom_sf	SUPERFAMILY	Concanavalin A-like lectin/glucanase domain superfamily
SPRY_dom	Pfam	SPRY domain
ASH2	PANTHER	Histone methyltransferase complex subunit ASH2

GOSlim

40 results

GO Term	Annotation Origin	Type
DNA binding	Orthology	molecular function
binding	Blast	molecular function
calcium ion binding	Blast	molecular function
protein binding	Orthology	molecular function
calmodulin binding	Blast	molecular function
extracellular region	Blast	cellular component
cell	Blast	cellular component
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
endoplasmic reticulum	Blast	cellular component
plasma membrane	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
ion transport	Blast	biological process
cellular response to DNA damage stimulus	Orthology	biological process
positive regulation of cell proliferation	Orthology	biological process
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
organelle membrane	Blast	cellular component
intracellular membrane-bounded organelle	Blast	cellular component
transcription regulatory region DNA binding	Orthology	molecular function
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Orthology	molecular function
perinuclear region of cytoplasm	Blast	cellular component
transmembrane transport	Blast	biological process
intracellular non-membrane-bounded organelle	Orthology	cellular component
nuclear lumen	Orthology	cellular component
organelle organization	Orthology	biological process
transferase activity	Orthology	molecular function
cellular protein modification process	Orthology	biological process
animal organ development	Orthology	biological process
immune system process	Orthology	biological process
nucleoplasm part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
response to stimulus	Orthology	biological process
chromatin binding	Orthology	molecular function
metal ion transport	Blast	biological process
intracellular signal transduction	Blast	biological process
endoplasmic reticulum membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component

GO (Orthology)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nuclear euchromatin	Hs	cellular component
chromatin organization	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
beta-catenin binding	Hs	molecular function
positive regulation of cell proliferation	Hs	biological process
histone-lysine N-methyltransferase activity	Hs	molecular function
hemopoiesis	Hs	biological process
histone methyltransferase complex	Hs	cellular component
histone methyltransferase activity (H3-K4 specific)	Hs	molecular function
response to estrogen	Hs	biological process
transcription regulatory region DNA binding	Hs	molecular function
MLL3/4 complex	Hs	cellular component
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function
Set1C/COMPASS complex	Hs	cellular component
histone H3-K4 methylation	Hs	biological process
MLL1 complex	Hs	cellular component
euchromatin binding	Hs	molecular function

GO (Blast)

34 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
DNA binding	Hs	molecular function	397	1.33e-134
ion channel activity	Hs	molecular function	50.4	1.17e-06
ryanodine-sensitive calcium-release channel activity	Hs	molecular function	50.4	1.17e-06
calcium channel activity	Hs	molecular function	50.4	1.17e-06
binding	Hs	molecular function	50.4	1.17e-06
calcium ion binding	Hs	molecular function	50.4	1.17e-06
protein binding	Hs	molecular function	397	1.33e-134
calmodulin binding	Hs	molecular function	50.4	1.17e-06
extracellular region	Hs	cellular component	49.7	1.57e-06
cell	Hs	cellular component	50.4	1.17e-06
nucleus	Hs	cellular component	397	1.33e-134
nucleoplasm	Hs	cellular component	397	1.33e-134
nuclear euchromatin	Hs	cellular component	397	1.33e-134
endoplasmic reticulum	Hs	cellular component	50.4	1.17e-06
plasma membrane	Hs	cellular component	50.4	1.17e-06
beta-catenin binding	Hs	molecular function	397	1.33e-134
calcium-release channel activity	Hs	molecular function	50.4	1.17e-06
membrane	Hs	cellular component	50.4	1.17e-06
integral component of membrane	Hs	cellular component	50.4	1.17e-06
sarcoplasmic reticulum	Hs	cellular component	50.4	1.17e-06
histone-lysine N-methyltransferase activity	Hs	molecular function	397	1.33e-134
organelle membrane	Hs	cellular component	50.4	1.17e-06
sarcoplasmic reticulum membrane	Hs	cellular component	50.4	1.17e-06
histone methyltransferase complex	Hs	cellular component	397	1.33e-134
histone methyltransferase activity (H3-K4 specific)	Hs	molecular function	397	1.33e-134
intracellular membrane-bounded organelle	Hs	cellular component	50.4	1.17e-06
transcription regulatory region DNA binding	Hs	molecular function	397	1.33e-134
MLL3/4 complex	Hs	cellular component	397	1.33e-134
metal ion binding	Hs	molecular function	397	1.33e-134
Set1C/COMPASS complex	Hs	cellular component	397	1.33e-134
perinuclear region of cytoplasm	Hs	cellular component	50.4	1.17e-06
calcium-induced calcium release activity	Hs	molecular function	50.4	1.17e-06
MLL1 complex	Hs	cellular component	397	1.33e-134
euchromatin binding	Hs	molecular function	397	1.33e-134

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
protein binding	SMART	molecular function	5.8E-29
Set1C/COMPASS complex	PANTHER	cellular component	1.2E-124
histone H3-K4 methylation	PANTHER	biological process	1.2E-124