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  1. Gene 'KH2012:KH.L65.21' > 
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Gene Card

Best human hits

PTPRA; PTPRC; PTPRE

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012351

Gene Model ID

KH2012:KH.L35.11

Location

KhL35:48978..60487

Transcript Models and Sequences

  KH2012:KH.L35.11.v1.B.SL2-1
KH2012:KH.L35.11.v1.R.ND1-1
KH2012:KH.L35.11.v2.B.SL2-1
KH2012:KH.L35.11.v2.R.ND1-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000007570
ENSEMBL ENSCING00000010240
NCBI Reference Sequence XM_018815898.1
Collections

Gene collection 1 (N. Satoh)

2 results

ciad037a15

Plate: R1CiGC04m05

cibd053h09

Plate: R1CiGC38m18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

19 results

IPR Term Analysis Definition
EGF-like_dom Pfam EGF-like domain
C-type_lectin-like Pfam C-type lectin-like
Prot-tyrosine_phosphatase-like SUPERFAMILY Protein-tyrosine phosphatase-like
EGF-like_CS ProSitePatterns EGF-like, conserved site
CTDL_fold SUPERFAMILY C-type lectin fold
Prot-tyrosine_phosphatase-like Gene3D Protein-tyrosine phosphatase-like
C-type_lectin-like SMART C-type lectin-like
C-type_lectin-like/link_sf Gene3D C-type lectin-like/link domain superfamily
C-type_lectin-like ProSiteProfiles C-type lectin-like
PTPase_domain Pfam PTP type protein phosphatase
PTPase_domain SMART PTP type protein phosphatase
Tyr_Pase_AS ProSitePatterns Protein-tyrosine phosphatase, active site
Tyr_Pase_cat SMART Protein-tyrosine phosphatase, catalytic
PTPase_domain PRINTS PTP type protein phosphatase
EGF-like_dom ProSiteProfiles EGF-like domain
PTPase_domain ProSiteProfiles PTP type protein phosphatase
TYR_PHOSPHATASE_dom ProSiteProfiles Tyrosine specific protein phosphatases domain
EGF-like_dom SMART EGF-like domain
EGF-like_Ca-bd_dom SMART EGF-like calcium-binding domain

GOSlim

18 results

GO Term Annotation Origin Type
protein binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
cytoplasm Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
protein dephosphorylation Blast biological process
membrane Blast cellular component
integral component of membrane Blast cellular component
dephosphorylation Blast biological process
hydrolase activity Blast molecular function
identical protein binding Blast molecular function
extracellular exosome Blast cellular component
calcium ion binding InterProScan molecular function
transmembrane signaling receptor activity Blast molecular function
enzyme binding Blast molecular function
molecular function regulator Blast molecular function
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
phosphoprotein phosphatase activity Hs molecular function 320 2.97e-96
protein tyrosine phosphatase activity Hs molecular function 320 2.97e-96
transmembrane receptor protein tyrosine phosphatase activity Hs molecular function 320 2.97e-96
Ras guanyl-nucleotide exchange factor activity Hs molecular function 304 3.59e-89
protein binding Hs molecular function 320 2.97e-96
intracellular Hs cellular component 304 3.59e-89
nucleus Hs cellular component 320 2.97e-96
cytoplasm Hs cellular component 320 2.97e-96
plasma membrane Hs cellular component 320 2.97e-96
integral component of plasma membrane Hs cellular component 304 3.59e-89
membrane Hs cellular component 320 2.97e-96
integral component of membrane Hs cellular component 320 2.97e-96
hydrolase activity Hs molecular function 320 2.97e-96
phosphatase activity Hs molecular function 320 2.97e-96
identical protein binding Hs molecular function 304 3.59e-89
receptor complex Hs cellular component 304 3.59e-89
extracellular exosome Hs cellular component 304 3.59e-89

GO (InterProScan)

5 results

GO Term Analysis Type e-value
protein tyrosine phosphatase activity SMART molecular function 5.8E-107
protein dephosphorylation SMART biological process 5.8E-107
dephosphorylation ProSiteProfiles biological process 15.561
phosphatase activity ProSiteProfiles molecular function 15.561
calcium ion binding SMART molecular function 9.8E-4

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