Login
Help

GENE CARD

Submit your Data

  1. > 
  2. > 
  3. > 

Gene Card

Best human hits

SLCO1B1; SLCO1B3; SLCO2A1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012493

Gene Model ID

KH2012:KH.L4.26

Location

KhL4:128810..135610

Transcript Models and Sequences

  KH2012:KH.L4.26.v1.C.SL2-1
KH2012:KH.L4.26.v1.R.ND1-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000007616
ENSEMBL ENSCING00000015293
NCBI Reference Sequence NM_001245057.1
Collections

Gateway full ORF

2 results

cima814116

Plate: VES58_D16

cien137316

Plate: VES91_F19

Gene collection 1 (N. Satoh)

1 result

cigd006n22

Plate: R1CiGC41m05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Kazal_dom ProSiteProfiles Kazal domain
MFS_dom ProSiteProfiles Major facilitator superfamily domain
Kazal_dom_sf SUPERFAMILY Kazal domain superfamily
Kazal_dom Pfam Kazal domain
OATP Pfam Organic anion transporter polypeptide
MFS_trans_sf SUPERFAMILY MFS transporter superfamily
OATP PANTHER Organic anion transporter polypeptide
OATP TIGRFAM Organic anion transporter polypeptide

GOSlim

9 results

GO Term Annotation Origin Type
protein binding Blast molecular function
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
ion transport Blast biological process
membrane Blast cellular component
integral component of membrane Blast cellular component
basolateral plasma membrane Blast cellular component
transmembrane transport Blast biological process
organic substance transport Blast biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
transporter activity Hs molecular function 305 1.70e-94
lipid transporter activity Hs molecular function 305 1.70e-94
protein binding Hs molecular function 305 1.70e-94
plasma membrane Hs cellular component 305 1.70e-94
integral component of plasma membrane Hs cellular component 305 1.70e-94
organic anion transmembrane transporter activity Hs molecular function 267 1.94e-79
bile acid transmembrane transporter activity Hs molecular function 268 4.78e-80
prostaglandin transmembrane transporter activity Hs molecular function 305 1.70e-94
sodium-independent organic anion transmembrane transporter activity Hs molecular function 305 1.70e-94
thyroid hormone transmembrane transporter activity Hs molecular function 268 4.78e-80
membrane Hs cellular component 305 1.70e-94
integral component of membrane Hs cellular component 305 1.70e-94
basolateral plasma membrane Hs cellular component 268 4.78e-80

GO (InterProScan)

4 results

GO Term Analysis Type e-value
transporter activity PANTHER molecular function 1.6E-257
protein binding Pfam molecular function 4.1E-7
membrane PANTHER cellular component 1.6E-257
transmembrane transport PANTHER biological process 1.6E-257

Back to Top