Aniseed - Gene card

Gene Card

Best human hits

CCT3; CCT4; CCT7

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012523

Gene Model ID

KH2012:KH.L4.55

Location

KhL4:77116..78899

Transcript Models and Sequences

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg003h10

Plate: R1CiGC15j16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
TCP-1-like_intermed_sf	Gene3D	TCP-1-like chaperonin intermediate domain superfamily
GROEL-like_equatorial_sf	SUPERFAMILY	GroEL-like equatorial domain superfamily
Chaperonin_TCP-1_CS	ProSitePatterns	Chaperonin TCP-1, conserved site
GroEL-like_apical_dom_sf	Gene3D	GroEL-like apical domain superfamily
Cpn60/TCP-1	PANTHER	Chaperonin Cpn60/TCP-1 family
Chaperone_TCP-1	PRINTS	Chaperone tailless complex polypeptide 1 (TCP-1)
Cpn60/TCP-1	Pfam	Chaperonin Cpn60/TCP-1 family
GROEL-like_equatorial_sf	Gene3D	GroEL-like equatorial domain superfamily
GroEL-like_apical_dom_sf	SUPERFAMILY	GroEL-like apical domain superfamily

GOSlim

22 results

GO Term	Annotation Origin	Type
nucleotide binding	Blast	molecular function
RNA binding	Blast	molecular function
protein binding	Blast	molecular function
ATP binding	Blast	molecular function
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
mitochondrion	Blast	cellular component
centrosome	Blast	cellular component
microtubule organizing center	Blast	cellular component
cytosol	Blast	cellular component
cytoskeleton	Blast	cellular component
microtubule	Blast	cellular component
plasma membrane	Blast	cellular component
protein folding	Blast	biological process
melanosome	Blast	cellular component
identical protein binding	Blast	molecular function
cell projection	Blast	cellular component
myelin sheath	Blast	cellular component
cell body	Blast	cellular component
unfolded protein binding	Blast	molecular function
extracellular exosome	Blast	cellular component
macromolecular complex	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	348	3.42e-116
zona pellucida receptor complex	Hs	cellular component	348	3.42e-116
RNA binding	Hs	molecular function	348	3.42e-116
protein binding	Hs	molecular function	348	3.42e-116
ATP binding	Hs	molecular function	348	3.42e-116
nucleoplasm	Hs	cellular component	131	9.36e-34
cytoplasm	Hs	cellular component	348	3.42e-116
mitochondrion	Hs	cellular component	132	5.08e-34
centrosome	Hs	cellular component	131	9.36e-34
microtubule organizing center	Hs	cellular component	131	9.36e-34
cytosol	Hs	cellular component	348	3.42e-116
chaperonin-containing T-complex	Hs	cellular component	348	3.42e-116
cytoskeleton	Hs	cellular component	348	3.42e-116
microtubule	Hs	cellular component	348	3.42e-116
plasma membrane	Hs	cellular component	348	3.42e-116
melanosome	Hs	cellular component	131	9.36e-34
identical protein binding	Hs	molecular function	132	5.08e-34
cell projection	Hs	cellular component	131	9.36e-34
myelin sheath	Hs	cellular component	348	3.42e-116
protein binding involved in protein folding	Hs	molecular function	348	3.42e-116
cell body	Hs	cellular component	348	3.42e-116
unfolded protein binding	Hs	molecular function	348	3.42e-116
extracellular exosome	Hs	cellular component	348	3.42e-116

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
ATP binding	PANTHER	molecular function	1.5E-198
protein folding	ProSitePatterns	biological process
unfolded protein binding	ProSitePatterns	molecular function

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Gateway full ORF

cien28070

cien60434

Gene collection 1 (N. Satoh)

cieg003h10

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)