Login
Help

GENE CARD

Submit your Data

  1. > 
  2. > 
  3. > 
  4. > 

Gene Card

Best human hits

PTPN14; PTPN21; PTPN4

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012730

Gene Model ID

KH2012:KH.L50.15

Location

KhL50:97936..129894

Transcript Models and Sequences

  KH2012:KH.L50.15.v1.B.SL1-1
KH2012:KH.L50.15.v1.B.SL2-1
KH2012:KH.L50.15.v2.B.SL3-1

External Database Gene Card

External database links

5 results

Database Gene ID
ENSEMBL ENSCING00000018473
NCBI Reference Sequence XM_009863400.1
NCBI Reference Sequence XM_018816078.1
NCBI Reference Sequence XM_018816079.1
NCBI Reference Sequence XM_018816080.1
Collections

Gateway full ORF

1 result

cien69134

Plate: VES81_F04

Gene collection 1 (N. Satoh)

2 results

cieg004n18

Plate: R1CiGC16k05

cieg090k03

Plate: R1CiGC40n17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

20 results

IPR Term Analysis Definition
FERM/acyl-CoA-bd_prot_sf Gene3D FERM/acyl-CoA-binding protein superfamily
PTPase_domain PRINTS PTP type protein phosphatase
PTPase_domain Pfam PTP type protein phosphatase
Ubiquitin-like_domsf SUPERFAMILY Ubiquitin-like domain superfamily
Band_41_domain PRINTS Band 4.1 domain
PTPase_domain SMART PTP type protein phosphatase
Tyr_Pase_cat SMART Protein-tyrosine phosphatase, catalytic
FERM_PH-like_C Pfam FERM, C-terminal PH-like domain
TYR_PHOSPHATASE_dom ProSiteProfiles Tyrosine specific protein phosphatases domain
FERM_central CDD FERM central domain
FERM_central Pfam FERM central domain
FERM_PH-like_C SMART FERM, C-terminal PH-like domain
FERM_domain ProSiteProfiles FERM domain
FERM_2 SUPERFAMILY FERM superfamily, second domain
FERM_N Pfam FERM, N-terminal
Band_41_domain SMART Band 4.1 domain
Prot-tyrosine_phosphatase-like SUPERFAMILY Protein-tyrosine phosphatase-like
PTPase_domain ProSiteProfiles PTP type protein phosphatase
Prot-tyrosine_phosphatase-like Gene3D Protein-tyrosine phosphatase-like
FERM_CS ProSitePatterns FERM conserved site

GOSlim

15 results

GO Term Annotation Origin Type
transcription cofactor activity Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
protein dephosphorylation Blast biological process
cytoskeletal protein binding Blast molecular function
membrane Blast cellular component
dephosphorylation Blast biological process
hydrolase activity Blast molecular function
plasma membrane part Blast cellular component
receptor binding Blast molecular function
protein kinase binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
transcription cofactor activity Hs molecular function 568 0.0
phosphoprotein phosphatase activity Hs molecular function 568 0.0
protein tyrosine phosphatase activity Hs molecular function 568 0.0
non-membrane spanning protein tyrosine phosphatase activity Hs molecular function 169 1.13e-42
protein binding Hs molecular function 568 0.0
nucleus Hs cellular component 568 0.0
nucleoplasm Hs cellular component 568 0.0
cytoplasm Hs cellular component 568 0.0
cytoskeleton Hs cellular component 568 0.0
plasma membrane Hs cellular component 169 1.13e-42
cytoskeletal protein binding Hs molecular function 169 1.13e-42
cytoplasmic side of plasma membrane Hs cellular component 169 1.13e-42
membrane Hs cellular component 169 1.13e-42
hydrolase activity Hs molecular function 568 0.0
phosphatase activity Hs molecular function 568 0.0
receptor tyrosine kinase binding Hs molecular function 568 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
protein tyrosine phosphatase activity SMART molecular function 1.9E-77
cytoskeleton ProSiteProfiles cellular component 62.492
protein dephosphorylation SMART biological process 1.9E-77
dephosphorylation ProSiteProfiles biological process 17.615
phosphatase activity ProSiteProfiles molecular function 17.615

Back to Top