Aniseed - Gene card

Gene Card

Best human hits

FRK; FYN; SRC

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012925

Gene Model ID

KH2012:KH.L65.19

Location

KhL65:157683..165141

Transcript Models and Sequences

KH2012:KH.L65.19.v1.A.ND1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000005770
NCBI Reference Sequence	XM_002123599.3

Collections

Gene collection 1 (N. Satoh)

1 result

cieg005e09

Plate: R1CiGC16o19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

18 results

IPR Term	Analysis	Definition
Tyr_kinase_cat_dom	SMART	Tyrosine-protein kinase, catalytic domain
SH3_domain	SMART	SH3 domain
Protein_kinase_ATP_BS	ProSitePatterns	Protein kinase, ATP binding site
Prot_kinase_dom	ProSiteProfiles	Protein kinase domain
Kinase-like_dom_sf	SUPERFAMILY	Protein kinase-like domain superfamily
Tyr_kinase_AS	ProSitePatterns	Tyrosine-protein kinase, active site
SH2	PRINTS	SH2 domain
SH3_domain	Pfam	SH3 domain
SH2_dom_sf	Gene3D	SH2 domain superfamily
Ser-Thr/Tyr_kinase_cat_dom	PRINTS	Serine-threonine/tyrosine-protein kinase, catalytic domain
SH2	Pfam	SH2 domain
SH2	SMART	SH2 domain
Ser-Thr/Tyr_kinase_cat_dom	Pfam	Serine-threonine/tyrosine-protein kinase, catalytic domain
SH3_domain	PRINTS	SH3 domain
SH3-like_dom_sf	SUPERFAMILY	SH3-like domain superfamily
SH2_dom_sf	SUPERFAMILY	SH2 domain superfamily
SH2	ProSiteProfiles	SH2 domain
SH3_domain	ProSiteProfiles	SH3 domain

GOSlim

61 results

GO Term	Annotation Origin	Type
nucleotide binding	Blast	molecular function
protein kinase activity	Blast	molecular function
signal transducer activity	Blast	molecular function
receptor binding	Blast	molecular function
integrin binding	Blast	molecular function
protein binding	Blast	molecular function
ATP binding	Blast	molecular function
extracellular region	Blast	cellular component
intracellular	Blast	cellular component
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
mitochondrion	Blast	cellular component
mitochondrial inner membrane	Blast	cellular component
lysosome	Blast	cellular component
endosome	Blast	cellular component
cytosol	Blast	cellular component
cytoskeleton	Blast	cellular component
plasma membrane	Blast	cellular component
protein phosphorylation	InterProScan	biological process
protein C-terminus binding	Blast	molecular function
tubulin binding	Blast	molecular function
membrane	Blast	cellular component
kinase activity	Blast	molecular function
transferase activity	Blast	molecular function
enzyme binding	Blast	molecular function
kinase binding	Blast	molecular function
protein kinase binding	Blast	molecular function
heme binding	Blast	molecular function
ubiquitin protein ligase binding	Blast	molecular function
identical protein binding	Blast	molecular function
neuron projection	Blast	cellular component
intracellular membrane-bounded organelle	Blast	cellular component
membrane raft	Blast	cellular component
metal ion binding	Blast	molecular function
perinuclear region of cytoplasm	Blast	cellular component
cell adhesion molecule binding	Blast	molecular function
extracellular exosome	Blast	cellular component
cell periphery	Blast	cellular component
cytoskeletal part	Blast	cellular component
macromolecular complex	Blast	cellular component
positive regulation of signal transduction	Blast	biological process
molecular function regulator	Blast	molecular function
macromolecular complex binding	Blast	molecular function
plasma membrane region	Blast	cellular component
organelle	Blast	cellular component
postsynapse	Blast	cellular component
neuron part	Blast	cellular component
transcription factor binding	Blast	molecular function
intracellular part	Blast	cellular component
plasma membrane part	Blast	cellular component
cell projection membrane	Blast	cellular component
cell leading edge	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
vacuolar part	Blast	cellular component
endomembrane system	Blast	cellular component
intracellular organelle lumen	Blast	cellular component
intracellular organelle part	Blast	cellular component
phosphotransferase activity, alcohol group as acceptor	Blast	molecular function
organic substance metabolic process	Blast	biological process
cytoskeletal protein binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

75 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	401	7.86e-137
G-protein coupled receptor binding	Hs	molecular function	366	9.04e-123
podosome	Hs	cellular component	371	1.03e-124
protein kinase activity	Hs	molecular function	401	7.86e-137
protein tyrosine kinase activity	Hs	molecular function	401	7.86e-137
non-membrane spanning protein tyrosine kinase activity	Hs	molecular function	401	7.86e-137
signal transducer activity	Hs	molecular function	366	9.04e-123
SH3/SH2 adaptor activity	Hs	molecular function	371	1.03e-124
protein kinase C binding	Hs	molecular function	371	1.03e-124
Ras guanyl-nucleotide exchange factor activity	Hs	molecular function	366	9.04e-123
receptor binding	Hs	molecular function	401	7.86e-137
insulin receptor binding	Hs	molecular function	371	1.03e-124
integrin binding	Hs	molecular function	371	1.03e-124
protein binding	Hs	molecular function	401	7.86e-137
ATP binding	Hs	molecular function	401	7.86e-137
extracellular region	Hs	cellular component	401	7.86e-137
intracellular	Hs	cellular component	401	7.86e-137
nucleus	Hs	cellular component	401	7.86e-137
nucleoplasm	Hs	cellular component	371	1.03e-124
cytoplasm	Hs	cellular component	401	7.86e-137
mitochondrion	Hs	cellular component	371	1.03e-124
mitochondrial inner membrane	Hs	cellular component	371	1.03e-124
lysosome	Hs	cellular component	371	1.03e-124
endosome	Hs	cellular component	366	9.04e-123
late endosome	Hs	cellular component	371	1.03e-124
cytosol	Hs	cellular component	401	7.86e-137
cytoskeleton	Hs	cellular component	371	1.03e-124
actin filament	Hs	cellular component	371	1.03e-124
plasma membrane	Hs	cellular component	401	7.86e-137
caveola	Hs	cellular component	371	1.03e-124
protein C-terminus binding	Hs	molecular function	371	1.03e-124
postsynaptic density	Hs	cellular component	371	1.03e-124
tubulin binding	Hs	molecular function	366	9.04e-123
membrane	Hs	cellular component	371	1.03e-124
kinase activity	Hs	molecular function	401	7.86e-137
transferase activity	Hs	molecular function	401	7.86e-137
enzyme binding	Hs	molecular function	371	1.03e-124
kinase binding	Hs	molecular function	371	1.03e-124
protein kinase binding	Hs	molecular function	371	1.03e-124
protein domain specific binding	Hs	molecular function	371	1.03e-124
heme binding	Hs	molecular function	371	1.03e-124
estrogen receptor binding	Hs	molecular function	371	1.03e-124
dendrite	Hs	cellular component	366	9.04e-123
extrinsic component of cytoplasmic side of plasma membrane	Hs	cellular component	401	7.86e-137
ubiquitin protein ligase binding	Hs	molecular function	371	1.03e-124
type 5 metabotropic glutamate receptor binding	Hs	molecular function	366	9.04e-123
ruffle membrane	Hs	cellular component	371	1.03e-124
azurophil granule lumen	Hs	cellular component	401	7.86e-137
specific granule lumen	Hs	cellular component	401	7.86e-137
SH2 domain binding	Hs	molecular function	371	1.03e-124
T cell receptor binding	Hs	molecular function	366	9.04e-123
CD4 receptor binding	Hs	molecular function	366	9.04e-123
CD8 receptor binding	Hs	molecular function	366	9.04e-123
identical protein binding	Hs	molecular function	366	9.04e-123
neuron projection	Hs	cellular component	371	1.03e-124
intracellular membrane-bounded organelle	Hs	cellular component	366	9.04e-123
phosphatidylinositol 3-kinase binding	Hs	molecular function	366	9.04e-123
ion channel binding	Hs	molecular function	371	1.03e-124
membrane raft	Hs	cellular component	366	9.04e-123
cadherin binding	Hs	molecular function	371	1.03e-124
metal ion binding	Hs	molecular function	366	9.04e-123
ephrin receptor binding	Hs	molecular function	371	1.03e-124
phosphatidylinositol-4,5-bisphosphate 3-kinase activity	Hs	molecular function	371	1.03e-124
tau protein binding	Hs	molecular function	366	9.04e-123
perinuclear region of cytoplasm	Hs	cellular component	371	1.03e-124
cell adhesion molecule binding	Hs	molecular function	371	1.03e-124
phosphoprotein binding	Hs	molecular function	371	1.03e-124
hormone receptor binding	Hs	molecular function	371	1.03e-124
peptide hormone receptor binding	Hs	molecular function	366	9.04e-123
extracellular exosome	Hs	cellular component	401	7.86e-137
growth factor receptor binding	Hs	molecular function	371	1.03e-124
connexin binding	Hs	molecular function	371	1.03e-124
cell periphery	Hs	cellular component	366	9.04e-123
scaffold protein binding	Hs	molecular function	371	1.03e-124
disordered domain specific binding	Hs	molecular function	366	9.04e-123

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
protein kinase activity	Pfam	molecular function	1.7E-96
protein tyrosine kinase activity	SMART	molecular function	7.1E-135
protein binding	SUPERFAMILY	molecular function	9.58E-13
ATP binding	ProSiteProfiles	molecular function	42.746
protein phosphorylation	SMART	biological process	7.1E-135