Aniseed - Gene card

External Database Gene Card

External database links

6 results

Database	Gene ID
ENSEMBL	ENSCING00000019781
ENSEMBL	ENSCING00000020308
ENSEMBL	ENSCING00000021111
NCBI Reference Sequence	XM_002120444.3
NCBI Reference Sequence	XM_009864084.2
NCBI Reference Sequence	XM_018816246.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb036f14

Plate: R1CiGC32e14

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
ATP-dep_Helicase_C	SMART	ATP-dependent helicase, C-terminal
Rad3/Chl1-like	TIGRFAM	ATP-dependent helicase Rad3/Chl1-like
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
ATP-dep_Helicase_C	Pfam	ATP-dependent helicase, C-terminal
Helic_SF1/SF2_ATP-bd_DinG/Rad3	ProSiteProfiles	Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type
Helicase-like_DEXD_c2	SMART	Helicase-like, DEXD box c2 type
DEAD_2	Pfam	DEAD2

GOSlim

23 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
nucleic acid binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Blast	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Blast	cellular component
nucleobase-containing compound metabolic process	Orthology	biological process
DNA replication	Orthology	biological process
DNA repair	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
hydrolase activity	Orthology	molecular function
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	Orthology	molecular function
nuclear membrane	Blast	cellular component
metal ion binding	Orthology	molecular function
DNA metabolic process	Orthology	biological process
organelle organization	Orthology	biological process
intracellular organelle part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
nucleoside-triphosphatase activity	Orthology	molecular function
cofactor binding	Orthology	molecular function

GO (Orthology)

27 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
telomere maintenance	Hs	biological process
strand displacement	Hs	biological process
chromosome, telomeric region	Hs	cellular component
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
ATP-dependent DNA helicase activity	Hs	molecular function
helicase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nucleobase-containing compound metabolic process	Hs	biological process
DNA replication	Hs	biological process
DNA repair	Hs	biological process
DNA recombination	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
ATP-dependent helicase activity	Hs	molecular function
regulation of double-strand break repair via homologous recombination	Hs	biological process
hydrolase activity	Hs	molecular function
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	Hs	molecular function
replication fork processing	Hs	biological process
DNA duplex unwinding	Hs	biological process
negative regulation of DNA recombination	Hs	biological process
metal ion binding	Hs	molecular function
iron-sulfur cluster binding	Hs	molecular function
4 iron, 4 sulfur cluster binding	Hs	molecular function

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	675	0.0
chromosome, telomeric region	Hs	cellular component	675	0.0
nucleic acid binding	Hs	molecular function	675	0.0
DNA binding	Hs	molecular function	675	0.0
chromatin binding	Hs	molecular function	315	8.85e-91
ATP-dependent DNA helicase activity	Hs	molecular function	675	0.0
helicase activity	Hs	molecular function	675	0.0
protein binding	Hs	molecular function	675	0.0
ATP binding	Hs	molecular function	675	0.0
nucleus	Hs	cellular component	675	0.0
nucleoplasm	Hs	cellular component	675	0.0
cytoplasm	Hs	cellular component	315	8.85e-91
ATP-dependent helicase activity	Hs	molecular function	675	0.0
hydrolase activity	Hs	molecular function	675	0.0
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	Hs	molecular function	675	0.0
nuclear membrane	Hs	cellular component	315	8.85e-91
metal ion binding	Hs	molecular function	675	0.0
iron-sulfur cluster binding	Hs	molecular function	675	0.0
4 iron, 4 sulfur cluster binding	Hs	molecular function	675	0.0

GO (InterProScan)

7 results

GO Term	Analysis	Type	e-value
nucleic acid binding	Pfam	molecular function	1.3E-51
DNA binding	Pfam	molecular function	6.2E-52
ATP-dependent DNA helicase activity	TIGRFAM	molecular function	4.5E-147
ATP binding	Pfam	molecular function	6.2E-52
nucleobase-containing compound metabolic process	Pfam	biological process	1.3E-51
ATP-dependent helicase activity	Pfam	molecular function	1.3E-51
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	SMART	molecular function	4.3E-54

Gene Card

Best human hits

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Unique Gene ID

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Transcript Models and Sequences