Gene Card
Best human hits
CSTF2T; EIF4B; EIF4H
Unique Gene ID
Cirobu.g00013227
Gene Model ID
KH2012:KH.L87.8
Location
KhL87:460049..465429
Transcript Models and Sequences
External database links
1 result
| Database | Gene ID |
|---|---|
| NCBI Reference Sequence | XM_009863560.2 |
Gateway full ORF
4 results
cien34829
Plate: VES75_B21
cien74116
Plate: VES82_J01
cien129687
Plate: VES90_D15
cien136792
Plate: VES91_N18
Gene collection 1 (N. Satoh)
1 result
ciad014e12
Plate: R1CiGC02b17
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
No Phylogeny Tree for this Gene.
InterPro
6 results
| IPR Term | Analysis | Definition |
|---|---|---|
| eIF4H_RRM | CDD | eIF4H, RNA recognition motif |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| RRM_dom | Pfam | RNA recognition motif domain |
| RRM_dom | SMART | RNA recognition motif domain |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
GOSlim
19 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleic acid binding | Blast | molecular function |
| RNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| intracellular | Blast | cellular component |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| cytosol | Blast | cellular component |
| translational initiation | Blast | biological process |
| membrane | Blast | cellular component |
| neuronal cell body | Blast | cellular component |
| perinuclear region of cytoplasm | Blast | cellular component |
| regulation of gene expression | Blast | biological process |
| nucleoside-triphosphatase activity | Blast | molecular function |
| macromolecular complex | Blast | cellular component |
| nucleoplasm part | Blast | cellular component |
| cytoplasmic part | Blast | cellular component |
| macromolecular complex binding | Blast | molecular function |
| cell adhesion molecule binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
23 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 132 | 5.66e-38 |
| RNA binding | Hs | molecular function | 132 | 5.66e-38 |
| mRNA binding | Hs | molecular function | 54.3 | 1.72e-08 |
| translation initiation factor activity | Hs | molecular function | 132 | 5.66e-38 |
| helicase activity | Hs | molecular function | 132 | 5.66e-38 |
| protein binding | Hs | molecular function | 132 | 5.66e-38 |
| intracellular | Hs | cellular component | 54.3 | 1.72e-08 |
| nucleus | Hs | cellular component | 54.3 | 1.72e-08 |
| nucleoplasm | Hs | cellular component | 54.3 | 1.72e-08 |
| cytoplasm | Hs | cellular component | 132 | 5.66e-38 |
| cytosol | Hs | cellular component | 132 | 5.66e-38 |
| polysome | Hs | cellular component | 132 | 5.66e-38 |
| mRNA cleavage and polyadenylation specificity factor complex | Hs | cellular component | 54.3 | 1.72e-08 |
| translation factor activity, RNA binding | Hs | molecular function | 132 | 5.66e-38 |
| membrane | Hs | cellular component | 132 | 5.66e-38 |
| eukaryotic translation initiation factor 4F complex | Hs | cellular component | 132 | 5.66e-38 |
| dendrite | Hs | cellular component | 56.2 | 4.23e-09 |
| RNA strand annealing activity | Hs | molecular function | 132 | 5.66e-38 |
| RNA strand-exchange activity | Hs | molecular function | 132 | 5.66e-38 |
| ribosomal small subunit binding | Hs | molecular function | 132 | 5.66e-38 |
| neuronal cell body | Hs | cellular component | 56.2 | 4.23e-09 |
| cadherin binding | Hs | molecular function | 132 | 5.66e-38 |
| perinuclear region of cytoplasm | Hs | cellular component | 132 | 5.66e-38 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 7.19E-25 |
