Aniseed - Gene card

Gene Card

Best human hits

IFT43

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00013465

Gene Model ID

KH2012:KH.L98.5

Location

KhL98:37697..40184

Transcript Models and Sequences

KH2012:KH.L98.5.v1.A.SL1-1
KH2012:KH.L98.5.v1.A.SL2-1

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

1 result

Gene collection 1 (N. Satoh)

2 results

cign050l08

Plate: R1CiGC42h07

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
IFT43	Pfam	Intraflagellar transport protein 43
IFT43	PANTHER	Intraflagellar transport protein 43

GOSlim

15 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
microtubule organizing center	Orthology	cellular component
cytoskeleton	Orthology	cellular component
microtubule cytoskeleton	Orthology	cellular component
cell projection organization	Orthology	biological process
cell projection	Orthology	cellular component
organelle	Orthology	cellular component
plasma membrane region	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cilium organization	Orthology	biological process
microtubule-based movement	Orthology	biological process
intracellular protein transport	Orthology	biological process
organelle part	Orthology	cellular component
cell projection part	Orthology	cellular component

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
microtubule organizing center	Hs	cellular component
cytoskeleton	Hs	cellular component
cilium	Hs	cellular component
microtubule cytoskeleton	Hs	cellular component
cell projection organization	Hs	biological process
intraciliary transport particle A	Hs	cellular component
intraciliary retrograde transport	Hs	biological process
intraciliary transport involved in cilium assembly	Hs	biological process
cell projection	Hs	cellular component
cilium assembly	Hs	biological process
ciliary tip	Hs	cellular component

GO (Blast)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	98.2	2.44e-25
cytoplasm	Hs	cellular component	98.2	2.44e-25
microtubule organizing center	Hs	cellular component	98.2	2.44e-25
cytoskeleton	Hs	cellular component	98.2	2.44e-25
cilium	Hs	cellular component	98.2	2.44e-25
microtubule cytoskeleton	Hs	cellular component	98.2	2.44e-25
intraciliary transport particle A	Hs	cellular component	98.2	2.44e-25
cell projection	Hs	cellular component	98.2	2.44e-25
ciliary tip	Hs	cellular component	98.2	2.44e-25

GO (InterProScan)