Gene Card
Best human hits
DDX27; DDX47; DDX49
Unique Gene ID
Cirobu.g00013615
Gene Model ID
KH2012:KH.S1136.6
Location
KhS1136:2371..4132
External database links
1 result
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000002081 |
Gateway full ORF
2 results
cien112239
Plate: VES87_O24
cien185000
Plate: VES98_N20
Gene collection 1 (N. Satoh)
1 result
citb038o24
Plate: R1CiGC32l05
n/a
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
10 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Helicase_ATP-bd | SMART | Helicase superfamily 1/2, ATP-binding domain |
| Helicase_ATP-bd | ProSiteProfiles | Helicase superfamily 1/2, ATP-binding domain |
| DEAD/DEAH_box_helicase_dom | Pfam | DEAD/DEAH box helicase domain |
| Helicase_C | Pfam | Helicase, C-terminal |
| P-loop_NTPase | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolase |
| Helicase_C | ProSiteProfiles | Helicase, C-terminal |
| Helicase_C | SMART | Helicase, C-terminal |
| RNA-helicase_DEAD-box_CS | ProSitePatterns | ATP-dependent RNA helicase DEAD-box, conserved site |
| RNA_helicase_DEAD_Q_motif | ProSiteProfiles | RNA helicase, DEAD-box type, Q motif |
| Helicase_C | CDD | Helicase, C-terminal |
GOSlim
19 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleotide binding | Orthology | molecular function |
| nucleic acid binding | Orthology | molecular function |
| RNA binding | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| ATP binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Orthology | cellular component |
| nucleolus | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
| mRNA processing | Orthology | biological process |
| apoptotic process | Orthology | biological process |
| RNA splicing | Orthology | biological process |
| membrane | Orthology | cellular component |
| hydrolase activity | Orthology | molecular function |
| nucleoside-triphosphatase activity | Orthology | molecular function |
| RNA processing | Orthology | biological process |
| cell surface receptor signaling pathway | Orthology | biological process |
| RNA metabolic process | Orthology | biological process |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
GO (Orthology)
19 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nucleotide binding | Hs | molecular function |
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| ATP-dependent RNA helicase activity | Hs | molecular function |
| helicase activity | Hs | molecular function |
| protein binding | Hs | molecular function |
| ATP binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| nucleolus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| rRNA processing | Hs | biological process |
| mRNA processing | Hs | biological process |
| apoptotic process | Hs | biological process |
| RNA splicing | Hs | biological process |
| extrinsic apoptotic signaling pathway via death domain receptors | Hs | biological process |
| RNA secondary structure unwinding | Hs | biological process |
| membrane | Hs | cellular component |
| hydrolase activity | Hs | molecular function |
GO (Blast)
14 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleotide binding | Hs | molecular function | 646 | 0.0 |
| nucleic acid binding | Hs | molecular function | 646 | 0.0 |
| RNA binding | Hs | molecular function | 646 | 0.0 |
| ATP-dependent RNA helicase activity | Hs | molecular function | 646 | 0.0 |
| helicase activity | Hs | molecular function | 646 | 0.0 |
| protein binding | Hs | molecular function | 646 | 0.0 |
| ATP binding | Hs | molecular function | 646 | 0.0 |
| nucleus | Hs | cellular component | 646 | 0.0 |
| nucleoplasm | Hs | cellular component | 646 | 0.0 |
| chromosome | Hs | cellular component | 275 | 2.65e-84 |
| nucleolus | Hs | cellular component | 646 | 0.0 |
| cytoplasm | Hs | cellular component | 646 | 0.0 |
| membrane | Hs | cellular component | 646 | 0.0 |
| hydrolase activity | Hs | molecular function | 646 | 0.0 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | Pfam | molecular function | 1.8E-49 |
| ATP binding | Pfam | molecular function | 1.8E-49 |
