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Gene Card

Best human hits

MAEL

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00014150

Gene Model ID

KH2012:KH.S1965.2

Location

KhS1965:64..2083

Transcript Models and Sequences

  KH2012:KH.S1965.2.v1.A.SL1-1

External Database Gene Card

External database links

1 result

Database Gene ID
NCBI Reference Sequence XM_002131142.2
Collections

Gateway full ORF

2 results

cien72407

Plate: VES81_F17

cien169281

Plate: VES96_A11

Gene collection 1 (N. Satoh)

1 result

cieg026p03

Plate: R1CiGC19j20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Maelstrom Pfam Maelstrom domain
HMG_box_dom_sf SUPERFAMILY High mobility group box domain superfamily
HMG_box_dom Pfam High mobility group box domain
HMG_box_dom_sf Gene3D High mobility group box domain superfamily

GOSlim

30 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
cell morphogenesis Orthology biological process
RNA polymerase II transcription factor activity, sequence-specific DNA binding Orthology molecular function
DNA binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
cellular response to DNA damage stimulus Orthology biological process
multicellular organism development Orthology biological process
spermatogenesis Orthology biological process
negative regulation of gene expression Orthology biological process
cell differentiation Orthology biological process
negative regulation of apoptotic process Orthology biological process
sequence-specific DNA binding Orthology molecular function
negative regulation of transcription, DNA-templated Orthology biological process
perinuclear region of cytoplasm Orthology cellular component
intracellular organelle part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
nuclear lumen Orthology cellular component
reproductive process Orthology biological process
male gamete generation Orthology biological process
intracellular signal transduction Orthology biological process
apoptotic process Orthology biological process
sexual reproduction Orthology biological process
cellular process Orthology biological process
cytoplasmic part Orthology cellular component
macromolecular complex Orthology cellular component
RNA metabolic process Orthology biological process
DNA metabolic process Orthology biological process
gamete generation Orthology biological process
developmental process Orthology biological process

GO (Orthology)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
chromatin Hs cellular component
cell morphogenesis Hs biological process
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
XY body Hs cellular component
DNA binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cellular response to DNA damage stimulus Hs biological process
synapsis Hs biological process
male meiotic nuclear division Hs biological process
multicellular organism development Hs biological process
spermatogenesis Hs biological process
intrinsic apoptotic signaling pathway in response to DNA damage Hs biological process
fertilization Hs biological process
negative regulation of gene expression Hs biological process
cell differentiation Hs biological process
autosome Hs cellular component
gene silencing by RNA Hs biological process
chromatoid body Hs cellular component
piRNA metabolic process Hs biological process
DNA methylation involved in gamete generation Hs biological process
negative regulation of apoptotic process Hs biological process
P granule Hs cellular component
sequence-specific DNA binding Hs molecular function
negative regulation of transcription, DNA-templated Hs biological process
regulation of organ growth Hs biological process
perinuclear region of cytoplasm Hs cellular component
meiotic cell cycle Hs biological process
regulation of gene silencing by miRNA Hs biological process
piP-body Hs cellular component

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
chromatin Hs cellular component 95.5 2.44e-21
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 95.5 2.44e-21
XY body Hs cellular component 95.5 2.44e-21
DNA binding Hs molecular function 95.5 2.44e-21
nucleus Hs cellular component 95.5 2.44e-21
cytoplasm Hs cellular component 95.5 2.44e-21
autosome Hs cellular component 95.5 2.44e-21
chromatoid body Hs cellular component 95.5 2.44e-21
P granule Hs cellular component 95.5 2.44e-21
sequence-specific DNA binding Hs molecular function 95.5 2.44e-21
perinuclear region of cytoplasm Hs cellular component 95.5 2.44e-21
piP-body Hs cellular component 95.5 2.44e-21

GO (InterProScan)

1 result

GO Term Analysis Type e-value
regulation of gene silencing by miRNA Pfam biological process 3.5E-34

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