Aniseed - Gene card

Gene Card

Best human hits

P4HB; PDIA2; PDILT

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00014435

Gene Model ID

KH2012:KH.S404.1

Location

KhS404:27346..36513

Transcript Models and Sequences

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000003133
NCBI Reference Sequence	XM_002129001.3
NCBI Reference Sequence	XM_009862357.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad019c19

Plate: R1CiGC03e05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Disulphide_isomerase	TIGRFAM	Disulphide isomerase
Thioredoxin_CS	ProSitePatterns	Thioredoxin, conserved site
Thioredoxin-like_sf	SUPERFAMILY	Thioredoxin-like superfamily
Thioredoxin_domain	Pfam	Thioredoxin domain
Prot_disulphide_isomerase	TIGRFAM	Protein disulphide isomerase
Thioredoxin_domain	ProSiteProfiles	Thioredoxin domain

GOSlim

34 results

GO Term	Annotation Origin	Type
RNA binding	Orthology	molecular function
integrin binding	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
cell	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum lumen	Orthology	cellular component
plasma membrane	Orthology	cellular component
focal adhesion	Orthology	cellular component
protein folding	Orthology	biological process
membrane	Orthology	cellular component
enzyme binding	Orthology	molecular function
melanosome	Orthology	cellular component
protein heterodimerization activity	Orthology	molecular function
oxidation-reduction process	Orthology	biological process
extracellular exosome	Orthology	cellular component
catalytic activity	Orthology	molecular function
cellular protein modification process	Orthology	biological process
organic cyclic compound binding	Orthology	molecular function
cytoplasmic part	Orthology	cellular component
intracellular membrane-bounded organelle	Orthology	cellular component
cellular process	Orthology	biological process
protein localization to endoplasmic reticulum	Orthology	biological process
binding	Orthology	molecular function
plasma membrane part	Orthology	cellular component
cell surface	Orthology	cellular component
endoplasmic reticulum part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cellular response to stress	Orthology	biological process
response to oxidative stress	Orthology	biological process
response to hypoxia	Orthology	biological process
intracellular signal transduction	Orthology	biological process
regulation of apoptotic process	Orthology	biological process
regulation of signal transduction	Orthology	biological process

GO (Orthology)

40 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA binding	Hs	molecular function
protein disulfide isomerase activity	Hs	molecular function
procollagen-proline 4-dioxygenase activity	Hs	molecular function
integrin binding	Hs	molecular function
steroid binding	Hs	molecular function
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
cell	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum lumen	Hs	cellular component
endoplasmic reticulum-Golgi intermediate compartment	Hs	cellular component
plasma membrane	Hs	cellular component
focal adhesion	Hs	cellular component
protein folding	Hs	biological process
protein retention in ER lumen	Hs	biological process
lipid binding	Hs	molecular function
external side of plasma membrane	Hs	cellular component
disulfide oxidoreductase activity	Hs	molecular function
peptide disulfide oxidoreductase activity	Hs	molecular function
membrane	Hs	cellular component
procollagen-proline 4-dioxygenase complex	Hs	cellular component
isomerase activity	Hs	molecular function
peptidyl-proline hydroxylation to 4-hydroxy-L-proline	Hs	biological process
peptidyl-proline hydroxylation	Hs	biological process
enzyme binding	Hs	molecular function
peptidyl-proline 4-dioxygenase activity	Hs	molecular function
cellular response to oxidative stress	Hs	biological process
endoplasmic reticulum chaperone complex	Hs	cellular component
protein folding in endoplasmic reticulum	Hs	biological process
response to endoplasmic reticulum stress	Hs	biological process
melanosome	Hs	cellular component
post-translational protein modification	Hs	biological process
cell redox homeostasis	Hs	biological process
positive regulation of viral entry into host cell	Hs	biological process
protein heterodimerization activity	Hs	molecular function
dioxygenase activity	Hs	molecular function
oxidation-reduction process	Hs	biological process
extracellular exosome	Hs	cellular component
cellular response to hypoxia	Hs	biological process
regulation of oxidative stress-induced intrinsic apoptotic signaling pathway	Hs	biological process

GO (Blast)

27 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	468	1.24e-160
protein disulfide isomerase activity	Hs	molecular function	468	1.24e-160
procollagen-proline 4-dioxygenase activity	Hs	molecular function	468	1.24e-160
integrin binding	Hs	molecular function	468	1.24e-160
steroid binding	Hs	molecular function	366	1.49e-120
protein binding	Hs	molecular function	468	1.24e-160
extracellular region	Hs	cellular component	468	1.24e-160
cell	Hs	cellular component	468	1.24e-160
endoplasmic reticulum	Hs	cellular component	468	1.24e-160
endoplasmic reticulum lumen	Hs	cellular component	468	1.24e-160
endoplasmic reticulum-Golgi intermediate compartment	Hs	cellular component	468	1.24e-160
plasma membrane	Hs	cellular component	468	1.24e-160
focal adhesion	Hs	cellular component	468	1.24e-160
lipid binding	Hs	molecular function	366	1.49e-120
external side of plasma membrane	Hs	cellular component	468	1.24e-160
disulfide oxidoreductase activity	Hs	molecular function	366	1.49e-120
peptide disulfide oxidoreductase activity	Hs	molecular function	468	1.24e-160
membrane	Hs	cellular component	468	1.24e-160
procollagen-proline 4-dioxygenase complex	Hs	cellular component	468	1.24e-160
isomerase activity	Hs	molecular function	468	1.24e-160
enzyme binding	Hs	molecular function	468	1.24e-160
peptidyl-proline 4-dioxygenase activity	Hs	molecular function	366	1.49e-120
endoplasmic reticulum chaperone complex	Hs	cellular component	468	1.24e-160
melanosome	Hs	cellular component	468	1.24e-160
protein heterodimerization activity	Hs	molecular function	468	1.24e-160
dioxygenase activity	Hs	molecular function	468	1.24e-160
extracellular exosome	Hs	cellular component	468	1.24e-160

GO (InterProScan)