Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000018639

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

citb028j22

Plate: R1CiGC31i14

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
UBQ-conjugat_E2	CDD	Ubiquitin-conjugating enzyme E2
UBQ-conjugat_E2	ProSiteProfiles	Ubiquitin-conjugating enzyme E2
UBQ-conjugat_E2	Pfam	Ubiquitin-conjugating enzyme E2
UBQ-conjugating_enzyme/RWD	Gene3D	Ubiquitin-conjugating enzyme/RWD-like
UBQ-conjugating_enzyme/RWD	SUPERFAMILY	Ubiquitin-conjugating enzyme/RWD-like
UBQ-conjugating_AS	ProSitePatterns	Ubiquitin-conjugating enzyme, active site

GOSlim

20 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
protein polyubiquitination	Orthology	biological process
chromatin binding	Orthology	molecular function
RNA binding	Blast	molecular function
ubiquitin-protein transferase activity	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Blast	cellular component
DNA repair	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
protein ubiquitination	Orthology	biological process
transferase activity	Orthology	molecular function
ubiquitin protein ligase binding	Orthology	molecular function
macromolecular complex	Blast	cellular component
extracellular exosome	Blast	cellular component
intracellular part	Blast	cellular component

GO (Orthology)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
chromatin binding	Hs	molecular function
ubiquitin-protein transferase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
DNA repair	Hs	biological process
protein monoubiquitination	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
protein ubiquitination	Hs	biological process
transferase activity	Hs	molecular function
ubiquitin protein ligase binding	Hs	molecular function
interstrand cross-link repair	Hs	biological process
protein autoubiquitination	Hs	biological process
ubiquitin protein ligase activity	Hs	molecular function
ubiquitin conjugating enzyme activity	Hs	molecular function
protein K63-linked ubiquitination	Hs	biological process
protein K48-linked ubiquitination	Hs	biological process
protein K11-linked ubiquitination	Hs	biological process

GO (Blast)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ubiquitin ligase complex	Hs	cellular component	129	3.90e-38
nucleotide binding	Hs	molecular function	235	4.66e-79
fibrillar center	Hs	cellular component	129	3.90e-38
chromatin binding	Hs	molecular function	235	4.66e-79
RNA binding	Hs	molecular function	129	3.90e-38
ubiquitin-protein transferase activity	Hs	molecular function	235	4.66e-79
protein binding	Hs	molecular function	235	4.66e-79
ATP binding	Hs	molecular function	235	4.66e-79
nucleus	Hs	cellular component	235	4.66e-79
nucleoplasm	Hs	cellular component	235	4.66e-79
nucleolus	Hs	cellular component	235	4.66e-79
cytoplasm	Hs	cellular component	235	4.66e-79
cytosol	Hs	cellular component	129	3.90e-38
transferase activity	Hs	molecular function	235	4.66e-79
UBC13-MMS2 complex	Hs	cellular component	129	3.90e-38
ubiquitin protein ligase binding	Hs	molecular function	235	4.66e-79
macromolecular complex	Hs	cellular component	129	3.90e-38
UBC13-UEV1A complex	Hs	cellular component	129	3.90e-38
ubiquitin binding	Hs	molecular function	129	3.90e-38
ubiquitin protein ligase activity	Hs	molecular function	235	4.66e-79
ubiquitin conjugating enzyme activity	Hs	molecular function	235	4.66e-79
extracellular exosome	Hs	cellular component	129	3.90e-38

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences