Aniseed - Gene card

Gene Card

Best human hits

HTR1A; HTR5A; HTR7

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00014681

Gene Model ID

KH2012:KH.S555.1

Location

KhS555:26931..32166

Transcript Models and Sequences

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000008611
NCBI Reference Sequence	XM_002130995.3
NCBI Reference Sequence	XM_018817059.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cicl042h06

Plate: R1CiGC12p13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
GPCR_Rhodpsn_7TM	ProSiteProfiles	GPCR, rhodopsin-like, 7TM
GPCR_Rhodpsn	Pfam	G protein-coupled receptor, rhodopsin-like
GPCR_Rhodpsn	ProSitePatterns	G protein-coupled receptor, rhodopsin-like
GPCR_Rhodpsn	PRINTS	G protein-coupled receptor, rhodopsin-like
Mel_rcpt_1	PANTHER	Melatonin receptor 1

GOSlim

28 results

GO Term	Annotation Origin	Type
signal transducer activity	Orthology	molecular function
G-protein coupled receptor activity	Orthology	molecular function
protein binding	Orthology	molecular function
Golgi apparatus	Blast	cellular component
plasma membrane	Orthology	cellular component
integral component of plasma membrane	Orthology	cellular component
signal transduction	Orthology	biological process
G-protein coupled receptor signaling pathway	Orthology	biological process
chemical synaptic transmission	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cell-cell signaling	Orthology	biological process
identical protein binding	Orthology	molecular function
organic cyclic compound binding	Orthology	molecular function
intracellular signal transduction	Orthology	biological process
sexual reproduction	Orthology	biological process
multicellular organismal reproductive process	Orthology	biological process
binding	Orthology	molecular function
macromolecular complex	Orthology	cellular component
protein transport	Orthology	biological process
regulation of signaling	Orthology	biological process
cation binding	Blast	molecular function
heterocyclic compound binding	Blast	molecular function
endoplasmic reticulum	Blast	cellular component
signaling receptor activity	Blast	molecular function
neuronal cell body	Blast	cellular component
receptor binding	Blast	molecular function

GO (Orthology)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
signal transducer activity	Hs	molecular function
G-protein coupled receptor activity	Hs	molecular function
protein binding	Hs	molecular function
plasma membrane	Hs	cellular component
integral component of plasma membrane	Hs	cellular component
signal transduction	Hs	biological process
G-protein coupled receptor signaling pathway	Hs	biological process
G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger	Hs	biological process
chemical synaptic transmission	Hs	biological process
circadian rhythm	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
melatonin receptor activity	Hs	molecular function
nucleoplasm	Hs	cellular component
cell-cell signaling	Hs	biological process
mating behavior	Hs	biological process
hormone binding	Hs	molecular function
glucose homeostasis	Hs	biological process
identical protein binding	Hs	molecular function
receptor complex	Hs	cellular component
regulation of insulin secretion	Hs	biological process
organic cyclic compound binding	Hs	molecular function

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
signal transducer activity	Hs	molecular function	95.5	8.16e-22
G-protein coupled receptor activity	Hs	molecular function	95.5	8.16e-22
G-protein coupled serotonin receptor activity	Hs	molecular function	95.5	8.16e-22
protein binding	Hs	molecular function	89.4	7.88e-20
rough endoplasmic reticulum	Hs	cellular component	90.9	1.47e-20
Golgi apparatus	Hs	cellular component	90.9	1.47e-20
plasma membrane	Hs	cellular component	95.5	8.16e-22
integral component of plasma membrane	Hs	cellular component	95.5	8.16e-22
membrane	Hs	cellular component	95.5	8.16e-22
integral component of membrane	Hs	cellular component	95.5	8.16e-22
dendrite	Hs	cellular component	90.9	1.47e-20
neurotransmitter receptor activity	Hs	molecular function	95.5	8.16e-22
perikaryon	Hs	cellular component	90.9	1.47e-20
serotonin binding	Hs	molecular function	95.5	8.16e-22
receptor-receptor interaction	Hs	molecular function	89.4	7.88e-20

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
G-protein coupled receptor activity	Pfam	molecular function	6.5E-41
G-protein coupled receptor signaling pathway	PANTHER	biological process	2.4E-105
integral component of membrane	PANTHER	cellular component	2.4E-105
melatonin receptor activity	PANTHER	molecular function	2.4E-105