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GENE CARD

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Gene Card

Best human hits

ERH

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00014888

Gene Model ID

KH2012:KH.S663.1

Location

KhS663:491..1369

Transcript Models and Sequences

  KH2012:KH.S663.1.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000021243
NCBI Reference Sequence XM_002130165.4
Collections

Gateway full ORF

2 results

cima832822

Plate: VES62_P10

cima880247

Plate: VES68_N17

Gene collection 1 (N. Satoh)

1 result

cieg029a14

Plate: R1CiGC20a18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
EHR_sf Gene3D Enhancer of rudimentary superfamily
Enh_rudimentary ProDom Enhancer of rudimentary
Enh_rudimentary PANTHER Enhancer of rudimentary
EHR_sf SUPERFAMILY Enhancer of rudimentary superfamily
Enh_rudimentary Pfam Enhancer of rudimentary
Enh_rudimentary PIRSF Enhancer of rudimentary

GOSlim

11 results

GO Term Annotation Origin Type
RNA binding Blast molecular function
protein binding Blast molecular function
cell cycle InterProScan biological process
midbody Blast cellular component
sequence-specific DNA binding Blast molecular function
nucleotide binding Blast molecular function
cytoplasmic part Blast cellular component
macromolecular complex Blast cellular component
phosphate-containing compound metabolic process InterProScan biological process
positive regulation of signal transduction InterProScan biological process
Notch signaling pathway InterProScan biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

5 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA binding Hs molecular function 187 2.12e-63
protein binding Hs molecular function 187 2.12e-63
methyl-CpG binding Hs molecular function 187 2.12e-63
midbody Hs cellular component 187 2.12e-63
methylosome Hs cellular component 187 2.12e-63

GO (InterProScan)

3 results

GO Term Analysis Type e-value
pyrimidine nucleotide biosynthetic process PANTHER biological process 1.8E-58
cell cycle PANTHER biological process 1.8E-58
positive regulation of Notch signaling pathway PANTHER biological process 1.8E-58

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