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Gene Card

Best human hits

GATA2; GATA3; GATA4

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00014947

Gene Model ID

KH2012:KH.S696.1

Location

KhS696:12936..17295

Transcript Models and Sequences

  KH2012:KH.S696.1.v1.A.nonSL3-1
KH2012:KH.S696.1.v1.A.nonSL4-1
KH2012:KH.S696.1.v1.R.ND1-1
KH2012:KH.S696.1.v2.A.SL5-1
KH2012:KH.S696.1.v2.R.ND2-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000015930
NCBI Reference Sequence XM_002122531.3
NCBI Reference Sequence XM_018817182.1
Collections

Gateway full ORF

1 result

cien106552

Plate: VES86_J23

Gene collection 1 (N. Satoh)

1 result

cilv041j09

Plate: R1CiGC28m12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

4 results

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Znf_NHR/GATA Gene3D Zinc finger, NHR/GATA-type
Znf_GATA SMART Zinc finger, GATA-type
Znf_GATA ProSiteProfiles Zinc finger, GATA-type
Znf_GATA Pfam Zinc finger, GATA-type
Znf_GATA PRINTS Zinc finger, GATA-type
Znf_GATA ProSitePatterns Zinc finger, GATA-type
TF_GATA-2/3 PIRSF Transcription factor, GATA-2/3

GOSlim

92 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
cell morphogenesis Orthology biological process
transcription regulatory region sequence-specific DNA binding Orthology molecular function
RNA polymerase II regulatory region sequence-specific DNA binding Orthology molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Orthology molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Orthology molecular function
core promoter proximal region sequence-specific DNA binding Orthology molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Orthology molecular function
immune system process Orthology biological process
DNA binding Orthology molecular function
chromatin binding Orthology molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function
transcription coactivator activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
transcription from RNA polymerase II promoter Orthology biological process
defense response Orthology biological process
signal transduction Orthology biological process
cell-cell signaling Orthology biological process
nervous system development Orthology biological process
axon guidance Orthology biological process
blood coagulation Orthology biological process
transcription factor binding Orthology molecular function
zinc ion binding Orthology molecular function
negative regulation of cell proliferation Orthology biological process
anatomical structure morphogenesis Orthology biological process
positive regulation of signal transduction Orthology biological process
positive regulation of gene expression Orthology biological process
negative regulation of gene expression Orthology biological process
nuclear body Blast cellular component
cytokine-mediated signaling pathway Orthology biological process
protein kinase binding Blast molecular function
cell differentiation Orthology biological process
neuron differentiation Orthology biological process
response to lipid Orthology biological process
sequence-specific DNA binding Orthology molecular function
transcription regulatory region DNA binding Orthology molecular function
innate immune response Orthology biological process
negative regulation of transcription, DNA-templated Orthology biological process
positive regulation of transcription, DNA-templated Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
metal ion binding Orthology molecular function
protein dimerization activity Orthology molecular function
anatomical structure formation involved in morphogenesis Orthology biological process
negative regulation of apoptotic process Orthology biological process
cell development Orthology biological process
intracellular non-membrane-bounded organelle Orthology cellular component
nuclear lumen Orthology cellular component
system development Orthology biological process
cell migration Orthology biological process
generation of neurons Orthology biological process
cellular process Orthology biological process
animal organ development Orthology biological process
receptor binding Orthology molecular function
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
organelle organization Orthology biological process
immune response Orthology biological process
cell Orthology cellular component
reproductive process Orthology biological process
multicellular organism development Orthology biological process
neuron projection development Orthology biological process
intracellular signal transduction Orthology biological process
peptidase activity, acting on L-amino acid peptides Orthology molecular function
central nervous system development Orthology biological process
neuron development Orthology biological process
brain development Orthology biological process
developmental process Orthology biological process
regulation of cellular metabolic process Orthology biological process
cellular protein modification process Orthology biological process
intracellular transport Orthology biological process
membrane organization Orthology biological process
lysosome Orthology cellular component
regulation of apoptotic process Orthology biological process
response to stimulus Orthology biological process
response to organic substance Orthology biological process
cell adhesion Orthology biological process
negative regulation of signal transduction Orthology biological process
Notch signaling pathway Orthology biological process
angiogenesis Orthology biological process
cell cycle Orthology biological process
cell surface receptor signaling pathway Orthology biological process
anatomical structure development Orthology biological process
cell motility Orthology biological process
cell morphogenesis involved in differentiation Orthology biological process
protein phosphorylation Orthology biological process
regulation of molecular function Orthology biological process
nuclear part Blast cellular component

GO (Orthology)

152 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
nuclear chromatin Hs cellular component
cell morphogenesis Hs biological process
transcription regulatory region sequence-specific DNA binding Hs molecular function
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
core promoter proximal region sequence-specific DNA binding Hs molecular function
core promoter sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
RNA polymerase II transcription factor binding Hs molecular function
enhancer sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function
urogenital system development Hs biological process
cell fate determination Hs biological process
neuron migration Hs biological process
cell activation Hs biological process
positive regulation of cytokine production Hs biological process
kidney development Hs biological process
lens development in camera-type eye Hs biological process
immune system process Hs biological process
DNA binding Hs molecular function
chromatin binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
transcription coactivator activity Hs molecular function
interleukin-2 receptor binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription factor complex Hs cellular component
chromatin remodeling Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
transcription from RNA polymerase II promoter Hs biological process
phagocytosis Hs biological process
defense response Hs biological process
humoral immune response Hs biological process
signal transduction Hs biological process
positive regulation of cytosolic calcium ion concentration Hs biological process
cell-cell signaling Hs biological process
nervous system development Hs biological process
axon guidance Hs biological process
blood coagulation Hs biological process
transcription factor binding Hs molecular function
zinc ion binding Hs molecular function
negative regulation of cell proliferation Hs biological process
male gonad development Hs biological process
response to virus Hs biological process
anatomical structure morphogenesis Hs biological process
post-embryonic development Hs biological process
positive regulation of signal transduction Hs biological process
response to gamma radiation Hs biological process
positive regulation of gene expression Hs biological process
negative regulation of gene expression Hs biological process
regulation of primitive erythrocyte differentiation Hs biological process
regulation of neuron projection development Hs biological process
phosphatidylinositol 3-kinase signaling Hs biological process
protein deubiquitination Hs biological process
cytokine-mediated signaling pathway Hs biological process
ventral spinal cord interneuron differentiation Hs biological process
central nervous system neuron development Hs biological process
pituitary gland development Hs biological process
hemopoiesis Hs biological process
cell differentiation Hs biological process
neuron differentiation Hs biological process
T cell differentiation Hs biological process
erythrocyte differentiation Hs biological process
TOR signaling Hs biological process
T cell differentiation in thymus Hs biological process
response to lipid Hs biological process
somatic stem cell population maintenance Hs biological process
regulation of histone acetylation Hs biological process
embryonic hemopoiesis Hs biological process
norepinephrine biosynthetic process Hs biological process
inner ear morphogenesis Hs biological process
response to drug Hs biological process
positive regulation of mast cell degranulation Hs biological process
regulation of neuron apoptotic process Hs biological process
sequence-specific DNA binding Hs molecular function
ear development Hs biological process
response to estrogen Hs biological process
transcription regulatory region DNA binding Hs molecular function
T-helper 2 cell differentiation Hs biological process
innate immune response Hs biological process
response to ethanol Hs biological process
positive regulation of T cell differentiation Hs biological process
positive regulation of cell differentiation Hs biological process
negative regulation of myeloid cell differentiation Hs biological process
positive regulation of erythrocyte differentiation Hs biological process
positive regulation of neuron differentiation Hs biological process
negative regulation of Notch signaling pathway Hs biological process
positive regulation of angiogenesis Hs biological process
negative regulation of cell cycle Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function
protein dimerization activity Hs molecular function
sympathetic nervous system development Hs biological process
thymus development Hs biological process
embryonic organ development Hs biological process
developmental growth Hs biological process
anatomical structure formation involved in morphogenesis Hs biological process
neuron fate commitment Hs biological process
homeostasis of number of cells within a tissue Hs biological process
negative regulation of inflammatory response Hs biological process
positive regulation of phagocytosis Hs biological process
T cell receptor signaling pathway Hs biological process
regulation of histone H3-K4 methylation Hs biological process
positive regulation of protein kinase B signaling Hs biological process
parathyroid gland development Hs biological process
pharyngeal system development Hs biological process
uterus development Hs biological process
positive regulation of phagocytosis, engulfment Hs biological process
definitive hemopoiesis Hs biological process
mesenchymal to epithelial transition Hs biological process
semicircular canal development Hs biological process
regulation of histone H3-K27 methylation Hs biological process
C2H2 zinc finger domain binding Hs molecular function
E-box binding Hs molecular function
cellular response to tumor necrosis factor Hs biological process
otic vesicle development Hs biological process
HMG box domain binding Hs molecular function
renal system development Hs biological process
nephric duct morphogenesis Hs biological process
GABAergic neuron differentiation Hs biological process
regulation of hematopoietic stem cell differentiation Hs biological process
regulation of establishment of cell polarity Hs biological process
negative regulation of cell motility Hs biological process
negative regulation of neural precursor cell proliferation Hs biological process
regulation of cellular response to X-ray Hs biological process
RNA polymerase II core promoter sequence-specific DNA binding Hs molecular function
core promoter binding Hs molecular function
p53 binding Hs molecular function
DNA binding, bending Hs molecular function
transcriptional repressor complex Hs cellular component
myeloid cell differentiation Hs biological process
platelet formation Hs biological process
chromatin DNA binding Hs molecular function
protein-DNA complex Hs cellular component
negative regulation of apoptotic process Hs biological process
cell development Hs biological process
erythrocyte development Hs biological process
positive regulation of peptidyl-tyrosine phosphorylation Hs biological process
platelet aggregation Hs biological process
transcriptional activation by promoter-enhancer looping Hs biological process
dendritic cell differentiation Hs biological process
negative regulation of transcription regulatory region DNA binding Hs biological process
negative regulation of extrinsic apoptotic signaling pathway in absence of ligand Hs biological process

GO (Blast)

38 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nuclear chromatin Hs cellular component 243 1.43e-74
transcription regulatory region sequence-specific DNA binding Hs molecular function 243 1.43e-74
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 243 1.43e-74
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 243 1.43e-74
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 238 2.89e-72
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 243 1.43e-74
core promoter proximal region sequence-specific DNA binding Hs molecular function 243 1.43e-74
core promoter sequence-specific DNA binding Hs molecular function 243 1.43e-74
transcription factor activity, RNA polymerase II transcription factor binding Hs molecular function 211 1.73e-62
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 243 1.43e-74
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 243 1.43e-74
RNA polymerase II transcription factor binding Hs molecular function 243 1.43e-74
enhancer sequence-specific DNA binding Hs molecular function 243 1.43e-74
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 243 1.43e-74
DNA binding Hs molecular function 243 1.43e-74
chromatin binding Hs molecular function 243 1.43e-74
transcription factor activity, sequence-specific DNA binding Hs molecular function 243 1.43e-74
transcription coactivator activity Hs molecular function 243 1.43e-74
interleukin-2 receptor binding Hs molecular function 243 1.43e-74
protein binding Hs molecular function 243 1.43e-74
nucleus Hs cellular component 243 1.43e-74
nucleoplasm Hs cellular component 243 1.43e-74
transcription factor complex Hs cellular component 243 1.43e-74
transcription factor binding Hs molecular function 243 1.43e-74
zinc ion binding Hs molecular function 243 1.43e-74
nuclear body Hs cellular component 211 1.73e-62
protein kinase binding Hs molecular function 211 1.73e-62
activating transcription factor binding Hs molecular function 211 1.73e-62
sequence-specific DNA binding Hs molecular function 243 1.43e-74
transcription regulatory region DNA binding Hs molecular function 243 1.43e-74
metal ion binding Hs molecular function 243 1.43e-74
protein dimerization activity Hs molecular function 243 1.43e-74
NFAT protein binding Hs molecular function 211 1.73e-62
co-SMAD binding Hs molecular function 211 1.73e-62
C2H2 zinc finger domain binding Hs molecular function 238 2.89e-72
E-box binding Hs molecular function 243 1.43e-74
HMG box domain binding Hs molecular function 243 1.43e-74
RNA polymerase II transcription factor complex Hs cellular component 211 1.73e-62

GO (InterProScan)

4 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding SMART molecular function 2.7E-25
regulation of transcription, DNA-templated Gene3D biological process 2.0E-31
zinc ion binding Gene3D molecular function 2.0E-31
sequence-specific DNA binding SMART molecular function 2.7E-25

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