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Gene Card

Best human hits

CEBPA; CEBPB; CEBPE

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00015018

Gene Model ID

KH2012:KH.S765.1

Location

KhS765:18507..24872

Transcript Models and Sequences

  KH2012:KH.S765.1.v1.A.nonSL4-1
KH2012:KH.S765.1.v1.R.ND2-1
KH2012:KH.S765.1.v2.A.SL5-1
KH2012:KH.S765.1.v2.R.ND1-1
KH2012:KH.S765.1.v3.A.ND3-1

External Database Gene Card

External database links

4 results

Database Gene ID
ENSEMBL ENSCING00000012332
NCBI Reference Sequence NM_001078533.1
NCBI Reference Sequence XM_018817210.1
NCBI Reference Sequence XM_018817211.1
Collections

Gateway full ORF

2 results

cima830980

Plate: VES61_L24

cima8115460

Plate: VES74_A12

Gene collection 1 (N. Satoh)

2 results

ciad070b16

Plate: R1CiGC07a19

cibd045g15

Plate: R1CiGC38c18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
bZIP ProSiteProfiles Basic-leucine zipper domain
bZIP SMART Basic-leucine zipper domain
bZIP Pfam Basic-leucine zipper domain

GOSlim

30 results

GO Term Annotation Origin Type
RNA polymerase II regulatory region sequence-specific DNA binding Blast molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Blast molecular function
DNA binding Blast molecular function
chromatin binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
transcription coactivator activity Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
regulation of transcription, DNA-templated InterProScan biological process
transcription factor binding Blast molecular function
kinase binding Blast molecular function
protein homodimerization activity Blast molecular function
intracellular membrane-bounded organelle Blast cellular component
sequence-specific DNA binding Blast molecular function
transcription regulatory region DNA binding Blast molecular function
ubiquitin-like protein ligase binding Blast molecular function
protein heterodimerization activity Blast molecular function
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
intracellular part Blast cellular component
macromolecular complex Blast cellular component
enzyme binding Blast molecular function
receptor binding Blast molecular function
nuclear part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

34 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
condensed chromosome, centromeric region Hs cellular component 40.4 0.001
nuclear chromatin Hs cellular component 40.4 0.001
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 40.4 0.001
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 43.9 8.82e-05
RNA polymerase II core promoter sequence-specific DNA binding Hs molecular function 40.4 0.001
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 43.9 8.82e-05
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 43.9 8.82e-05
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 40.4 0.001
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 41.6 5.88e-04
DNA binding Hs molecular function 43.9 8.82e-05
chromatin binding Hs molecular function 40.4 0.001
transcription factor activity, sequence-specific DNA binding Hs molecular function 43.9 8.82e-05
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 41.6 5.88e-04
transcription coactivator activity Hs molecular function 41.6 5.88e-04
protein binding Hs molecular function 43.9 8.82e-05
nucleus Hs cellular component 43.9 8.82e-05
nucleoplasm Hs cellular component 43.9 8.82e-05
transcription factor complex Hs cellular component 41.6 5.88e-04
nucleolus Hs cellular component 41.6 5.88e-04
cytoplasm Hs cellular component 40.4 0.001
transcription factor binding Hs molecular function 41.6 5.88e-04
nuclear matrix Hs cellular component 40.4 0.001
kinase binding Hs molecular function 41.6 5.88e-04
histone acetyltransferase binding Hs molecular function 40.4 0.001
glucocorticoid receptor binding Hs molecular function 40.4 0.001
CHOP-C/EBP complex Hs cellular component 40.4 0.001
protein homodimerization activity Hs molecular function 43.9 8.82e-05
histone deacetylase binding Hs molecular function 40.4 0.001
intracellular membrane-bounded organelle Hs cellular component 41.6 5.88e-04
sequence-specific DNA binding Hs molecular function 41.6 5.88e-04
transcription regulatory region DNA binding Hs molecular function 41.6 5.88e-04
ubiquitin-like protein ligase binding Hs molecular function 40.4 0.001
protein heterodimerization activity Hs molecular function 43.9 8.82e-05
RNA polymerase II transcription factor complex Hs cellular component 41.6 5.88e-04

GO (InterProScan)

2 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding Pfam molecular function 1.0E-5
regulation of transcription, DNA-templated Pfam biological process 1.0E-5

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