Gene Card
Best human hits
RPL13
Unique Gene ID
Cirobu.g00015068
Gene Model ID
KH2012:KH.S793.1
Location
KhS793:15033..17784
Transcript Models and Sequences
KH2012:KH.S793.1.v1.A.ND5-1
KH2012:KH.S793.1.v1.A.nonSL1-1
KH2012:KH.S793.1.v1.A.nonSL3-1
KH2012:KH.S793.1.v1.A.nonSL4-1
KH2012:KH.S793.1.v2.A.ND2-1
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000002582 |
| NCBI Reference Sequence | XM_002128744.3 |
Gateway full ORF
2 results
cima824987
Plate: VES60_C20
cima856216
Plate: VES63_M22
Gene collection 1 (N. Satoh)
3 results
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
4 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Ribosomal_L13e_CS | ProSitePatterns | Ribosomal protein L13e, conserved site |
| Ribosomal_L13e | PANTHER | Ribosomal protein L13e |
| Ribosomal_L13e | Hamap | Ribosomal protein L13e |
| Ribosomal_L13e | Pfam | Ribosomal protein L13e |
GOSlim
15 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Orthology | biological process |
| RNA binding | Orthology | molecular function |
| structural constituent of ribosome | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| intracellular | Orthology | cellular component |
| nucleus | Orthology | cellular component |
| nucleolus | Orthology | cellular component |
| endoplasmic reticulum | Orthology | cellular component |
| cytosol | Orthology | cellular component |
| ribosome | Orthology | cellular component |
| translational initiation | Orthology | biological process |
| SRP-dependent cotranslational protein targeting to membrane | Orthology | biological process |
| membrane | Orthology | cellular component |
| RNA processing | Orthology | biological process |
| intracellular organelle part | Orthology | cellular component |
GO (Orthology)
18 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Hs | biological process |
| RNA binding | Hs | molecular function |
| structural constituent of ribosome | Hs | molecular function |
| protein binding | Hs | molecular function |
| intracellular | Hs | cellular component |
| nucleus | Hs | cellular component |
| nucleolus | Hs | cellular component |
| endoplasmic reticulum | Hs | cellular component |
| cytosol | Hs | cellular component |
| ribosome | Hs | cellular component |
| rRNA processing | Hs | biological process |
| translation | Hs | biological process |
| translational initiation | Hs | biological process |
| SRP-dependent cotranslational protein targeting to membrane | Hs | biological process |
| membrane | Hs | cellular component |
| cytosolic large ribosomal subunit | Hs | cellular component |
| cytosolic ribosome | Hs | cellular component |
| intracellular ribonucleoprotein complex | Hs | cellular component |
GO (Blast)
13 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA binding | Hs | molecular function | 259 | 2.04e-88 |
| structural constituent of ribosome | Hs | molecular function | 259 | 2.04e-88 |
| protein binding | Hs | molecular function | 259 | 2.04e-88 |
| intracellular | Hs | cellular component | 259 | 2.04e-88 |
| nucleus | Hs | cellular component | 259 | 2.04e-88 |
| nucleolus | Hs | cellular component | 259 | 2.04e-88 |
| endoplasmic reticulum | Hs | cellular component | 259 | 2.04e-88 |
| cytosol | Hs | cellular component | 259 | 2.04e-88 |
| ribosome | Hs | cellular component | 259 | 2.04e-88 |
| membrane | Hs | cellular component | 259 | 2.04e-88 |
| cytosolic large ribosomal subunit | Hs | cellular component | 259 | 2.04e-88 |
| cytosolic ribosome | Hs | cellular component | 259 | 2.04e-88 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 259 | 2.04e-88 |
GO (InterProScan)
4 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| structural constituent of ribosome | PANTHER | molecular function | 1.3E-83 |
| intracellular | PANTHER | cellular component | 1.3E-83 |
| ribosome | PANTHER | cellular component | 1.3E-83 |
| translation | PANTHER | biological process | 1.3E-83 |
