Gene Card
Best human hits
PRPF19; WDR27; WDR47
Unique Gene ID
Cirobu.g00015161
Gene Model ID
KH2012:KH.S899.5
Location
KhS899:9793..13996
Transcript Models and Sequences
KH2012:KH.S899.5.v1.A.nonSL4-1
KH2012:KH.S899.5.v1.A.SL3-1
KH2012:KH.S899.5.v1.R.ND2-1
KH2012:KH.S899.5.v2.A.nonSL4-1
KH2012:KH.S899.5.v2.R.ND1-1
External database links
2 results
| Database | Gene ID |
|---|---|
| NCBI Reference Sequence | XM_009863758.2 |
| NCBI Reference Sequence | XM_018817281.1 |
Gene collection 1 (N. Satoh)
2 results
cits031n17
Plate: R1CiGC34c07
cigd033m24
Plate: R1CiGC41d01
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| WD40_repeat_dom | ProSiteProfiles | WD40-repeat-containing domain |
| WD40_repeat | SMART | WD40 repeat |
| WD40/YVTN_repeat-like_dom_sf | Gene3D | WD40/YVTN repeat-like-containing domain superfamily |
| WD40_repeat_dom_sf | SUPERFAMILY | WD40-repeat-containing domain superfamily |
| Quinoprotein_ADH-like_supfam | SUPERFAMILY | Quinoprotein alcohol dehydrogenase-like superfamily |
GOSlim
18 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| ubiquitin-protein transferase activity | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| cytoskeleton | Blast | cellular component |
| microtubule | Blast | cellular component |
| membrane | Blast | cellular component |
| nuclear speck | Blast | cellular component |
| transferase activity | Blast | molecular function |
| identical protein binding | Blast | molecular function |
| macromolecular complex | Blast | cellular component |
| nucleoplasm part | Blast | cellular component |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| nuclear part | Blast | cellular component |
| cytoskeletal part | Blast | cellular component |
| microtubule cytoskeleton | Blast | cellular component |
| intracellular organelle part | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
22 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| Prp19 complex | Hs | cellular component | 42.7 | 7.25e-04 |
| ubiquitin-protein transferase activity | Hs | molecular function | 42.7 | 7.25e-04 |
| protein binding | Hs | molecular function | 188 | 1.11e-49 |
| nucleus | Hs | cellular component | 42.7 | 7.25e-04 |
| nucleoplasm | Hs | cellular component | 188 | 1.11e-49 |
| DNA replication factor A complex | Hs | cellular component | 42.7 | 7.25e-04 |
| spliceosomal complex | Hs | cellular component | 42.7 | 7.25e-04 |
| cytoplasm | Hs | cellular component | 42.7 | 7.25e-04 |
| lipid droplet | Hs | cellular component | 42.7 | 7.25e-04 |
| spindle | Hs | cellular component | 42.7 | 7.25e-04 |
| cytoskeleton | Hs | cellular component | 42.7 | 7.25e-04 |
| microtubule | Hs | cellular component | 42.7 | 0.001 |
| membrane | Hs | cellular component | 42.7 | 7.25e-04 |
| nuclear speck | Hs | cellular component | 42.7 | 7.25e-04 |
| transferase activity | Hs | molecular function | 42.7 | 7.25e-04 |
| ubiquitin-ubiquitin ligase activity | Hs | molecular function | 42.7 | 7.25e-04 |
| site of double-strand break | Hs | cellular component | 42.7 | 7.25e-04 |
| identical protein binding | Hs | molecular function | 42.7 | 7.25e-04 |
| ubiquitin protein ligase activity | Hs | molecular function | 42.7 | 7.25e-04 |
| U2-type catalytic step 1 spliceosome | Hs | cellular component | 42.7 | 7.25e-04 |
| U2-type catalytic step 2 spliceosome | Hs | cellular component | 42.7 | 7.25e-04 |
| catalytic step 2 spliceosome | Hs | cellular component | 42.7 | 7.25e-04 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | Gene3D | molecular function | 1.5E-18 |
