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GENE CARD

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Gene Card

Best human hits

GPATCH2; GPATCH2L; SUGP1

Species

C.savignyi

Unique Gene ID

Cisavi.g00001087

Gene Model ID

Cisavi.CG.ENS81.R11.390195-392778

Location

R11:390194..392778

Transcript Models and Sequences

  Cisavi.CG.ENS81.R11.390195-392778.06342.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Gpatch2 PANTHER G patch domain-containing protein 2
G_patch_dom SMART G-patch domain
G_patch_dom Pfam G-patch domain
G_patch_dom ProSiteProfiles G-patch domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 87.8 3.85e-19
RNA binding Hs molecular function 43.9 8.28e-05
protein binding Hs molecular function 64.7 1.36e-11
nucleus Hs cellular component 87.8 3.85e-19
nucleoplasm Hs cellular component 43.9 8.28e-05
spliceosomal complex Hs cellular component 43.9 8.28e-05
nucleolus Hs cellular component 87.8 3.85e-19
nuclear speck Hs cellular component 87.8 3.85e-19

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 2.9E-15