Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

CD53; TSPAN11; TSPAN9

Species

C.savignyi

Unique Gene ID

Cisavi.g00001171

Gene Model ID

Cisavi.CG.ENS81.R112.462215-464526

Location

R112:462214..464526

Transcript Models and Sequences

  Cisavi.CG.ENS81.R112.462215-464526.08958.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Tetraspanin/Peripherin Pfam Tetraspanin/Peripherin
Tetraspanin_EC2_sf Gene3D Tetraspanin, EC2 domain superfamily
Tetraspanin_EC2_sf SUPERFAMILY Tetraspanin, EC2 domain superfamily
Tetraspanin PRINTS Tetraspanin
Tetraspanin PIRSF Tetraspanin
Tetraspanin_CS ProSitePatterns Tetraspanin, conserved site

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

4 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
integral component of plasma membrane Hs cellular component
cell surface receptor signaling pathway Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
immunological synapse Hs cellular component 106 2.34e-28
protein binding Hs molecular function 106 2.34e-28
plasma membrane Hs cellular component 126 1.59e-35
integral component of plasma membrane Hs cellular component 126 1.59e-35
cell-cell junction Hs cellular component 106 2.34e-28
focal adhesion Hs cellular component 126 1.59e-35
cell surface Hs cellular component 106 2.34e-28
membrane Hs cellular component 126 1.59e-35
integral component of membrane Hs cellular component 126 1.59e-35
cell junction Hs cellular component 106 2.34e-28
specific granule membrane Hs cellular component 106 2.34e-28
extracellular exosome Hs cellular component 106 2.34e-28
tertiary granule membrane Hs cellular component 106 2.34e-28
tetraspanin-enriched microdomain Hs cellular component 126 1.59e-35

GO (InterProScan)

1 result

GO Term Analysis Type e-value
integral component of membrane PIRSF cellular component 3.5E-49