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GENE CARD

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Gene Card

Best human hits

PRICKLE1; PRICKLE2; TES

Species

C.savignyi

Unique Gene ID

Cisavi.g00001561

Gene Model ID

Cisavi.CG.ENS81.R122.277327-283215

Location

R122:277326..283215

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
PET_domain ProSiteProfiles PET domain
PET_testin CDD PET testin
PET_domain Pfam PET domain
Znf_LIM SMART Zinc finger, LIM-type
Znf_LIM Pfam Zinc finger, LIM-type
Znf_LIM ProSitePatterns Zinc finger, LIM-type
Znf_LIM ProSiteProfiles Zinc finger, LIM-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
focal adhesion Hs cellular component
zinc ion binding Hs molecular function
negative regulation of cell proliferation Hs biological process
cell junction Hs cellular component
macromolecular complex Hs cellular component
regulation of cell proliferation Hs biological process
cadherin binding Hs molecular function
metal ion binding Hs molecular function
negative regulation of transcription from RNA polymerase II promoter Hs biological process
transcription corepressor activity Hs molecular function
extracellular space Hs cellular component
nucleoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
extracellular matrix Hs cellular component

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 303 7.96e-99
protein binding Hs molecular function 303 7.96e-99
nucleus Hs cellular component 303 7.96e-99
cytoplasm Hs cellular component 303 7.96e-99
cytosol Hs cellular component 303 7.96e-99
plasma membrane Hs cellular component 303 7.96e-99
focal adhesion Hs cellular component 303 7.96e-99
zinc ion binding Hs molecular function 303 7.96e-99
membrane Hs cellular component 269 6.01e-81
cell junction Hs cellular component 303 7.96e-99
nuclear membrane Hs cellular component 269 6.01e-81
macromolecular complex Hs cellular component 303 7.96e-99
cadherin binding Hs molecular function 303 7.96e-99
metal ion binding Hs molecular function 303 7.96e-99

GO (InterProScan)

1 result

GO Term Analysis Type e-value
zinc ion binding Pfam molecular function 1.1E-34