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GENE CARD

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Gene Card

Best human hits

LAMA1; LAMA2; LAMC3

Species

C.savignyi

Unique Gene ID

Cisavi.g00002203

Gene Model ID

Cisavi.CG.ENS81.R14.680078-702248

Location

R14:680077..702248

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

19 results

IPR Term Analysis Definition
Laminin_dom_II Pfam Laminin domain II
Laminin_N SMART Laminin, N-terminal
ConA-like_dom_sf SUPERFAMILY Concanavalin A-like lectin/glucanase domain superfamily
Laminin_EGF Pfam Laminin EGF domain
Laminin_EGF SMART Laminin EGF domain
Laminin_G Pfam Laminin G domain
Laminin_IV ProSiteProfiles Laminin IV
Galactose-bd-like_sf SUPERFAMILY Galactose-binding-like domain superfamily
Laminin_EGF ProSitePatterns Laminin EGF domain
Laminin_N ProSiteProfiles Laminin, N-terminal
Laminin_N_sf Gene3D Laminin, N-terminal domain superfamily
Laminin_N Pfam Laminin, N-terminal
Laminin_G SMART Laminin G domain
Laminin_G ProSiteProfiles Laminin G domain
EGF-like_dom SMART EGF-like domain
Laminin_IV Pfam Laminin IV
Laminin_EGF ProSiteProfiles Laminin EGF domain
EGF-like_CS ProSitePatterns EGF-like, conserved site
Laminin_IV SMART Laminin IV

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
receptor binding Hs molecular function
structural molecule activity Hs molecular function
extracellular matrix structural constituent Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
proteinaceous extracellular matrix Hs cellular component
basement membrane Hs cellular component
basal lamina Hs cellular component
laminin-1 complex Hs cellular component
laminin-3 complex Hs cellular component
extracellular space Hs cellular component
cell adhesion Hs biological process
cell surface receptor signaling pathway Hs biological process
axon guidance Hs biological process
muscle organ development Hs biological process
protein C-terminus binding Hs molecular function
Schwann cell differentiation Hs biological process
membrane Hs cellular component
regulation of cell adhesion Hs biological process
extracellular matrix organization Hs biological process
regulation of cell migration Hs biological process
extracellular matrix Hs cellular component
positive regulation of synaptic transmission, cholinergic Hs biological process
sarcolemma Hs cellular component
dendritic spine Hs cellular component
regulation of embryonic development Hs biological process
extracellular exosome Hs cellular component

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
receptor binding Hs molecular function 2036 0.0
structural molecule activity Hs molecular function 2036 0.0
extracellular matrix structural constituent Hs molecular function 1943 0.0
protein binding Hs molecular function 1943 0.0
extracellular region Hs cellular component 2036 0.0
proteinaceous extracellular matrix Hs cellular component 2036 0.0
basement membrane Hs cellular component 2036 0.0
basal lamina Hs cellular component 2036 0.0
laminin-1 complex Hs cellular component 1943 0.0
laminin-3 complex Hs cellular component 1943 0.0
extracellular space Hs cellular component 2036 0.0
protein C-terminus binding Hs molecular function 1943 0.0
membrane Hs cellular component 1943 0.0
extracellular matrix Hs cellular component 2036 0.0
sarcolemma Hs cellular component 2036 0.0
dendritic spine Hs cellular component 2036 0.0
extracellular exosome Hs cellular component 2036 0.0

GO (InterProScan)

1 result

GO Term Analysis Type e-value
cell adhesion Pfam biological process 1.7E-11