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GENE CARD

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Gene Card

Best human hits

SMU1; WDR5; WDR5B

Species

C.savignyi

Unique Gene ID

Cisavi.g00002733

Gene Model ID

Cisavi.CG.ENS81.R156.349888-357454

Location

R156:349887..357454

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
WD40_repeat SMART WD40 repeat
WD40_repeat Pfam WD40 repeat
LisH ProSiteProfiles LIS1 homology motif
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site
LisH SMART LIS1 homology motif
WD40_repeat ProSiteProfiles WD40 repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
regulation of alternative mRNA splicing, via spliceosome Hs biological process
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
mRNA processing Hs biological process
RNA splicing Hs biological process
nuclear speck Hs cellular component

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
histone acetyltransferase complex Hs cellular component 111 6.85e-27
protein binding Hs molecular function 827 0.0
intracellular Hs cellular component 111 6.85e-27
nucleus Hs cellular component 827 0.0
nucleoplasm Hs cellular component 111 6.85e-27
Ada2/Gcn5/Ada3 transcription activator complex Hs cellular component 111 6.85e-27
cytoplasm Hs cellular component 827 0.0
nuclear speck Hs cellular component 827 0.0
histone-lysine N-methyltransferase activity Hs molecular function 111 6.85e-27
methylated histone binding Hs molecular function 111 6.85e-27
histone methyltransferase complex Hs cellular component 111 6.85e-27
ciliary basal body Hs cellular component 111 6.85e-27
histone methyltransferase activity (H3-K4 specific) Hs molecular function 111 6.85e-27
histone acetyltransferase activity (H4-K5 specific) Hs molecular function 111 6.85e-27
histone acetyltransferase activity (H4-K8 specific) Hs molecular function 111 6.85e-27
MLL3/4 complex Hs cellular component 111 6.85e-27
histone acetyltransferase activity (H4-K16 specific) Hs molecular function 111 6.85e-27
Set1C/COMPASS complex Hs cellular component 111 6.85e-27
MLL1 complex Hs cellular component 111 6.85e-27

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 1.28E-58